LOCUS       BC003367                3396 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens heterogeneous nuclear ribonucleoprotein U (scaffold
            attachment factor A), mRNA (cDNA clone MGC:5216 IMAGE:2900876),
            complete cds.
ACCESSION   BC003367
VERSION     BC003367.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3396)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3396)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-FEB-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 3 Row: m Column: 15
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 14141160.
FEATURES             Location/Qualifiers
     source          1..3396
                     /db_xref="H-InvDB:HIT000031521"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:5216 IMAGE:2900876"
                     /tissue_type="Placenta, choriocarcinoma"
                     /clone_lib="NIH_MGC_10"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..3396
                     /gene="HNRPU"
                     /gene_synonym="HNRNPU"
                     /gene_synonym="SAF-A"
                     /gene_synonym="U21.1"
                     /db_xref="GeneID:3192"
                     /db_xref="HGNC:HGNC:5048"
                     /db_xref="MIM:602869"
     CDS             150..2570
                     /gene="HNRPU"
                     /gene_synonym="HNRNPU"
                     /gene_synonym="SAF-A"
                     /gene_synonym="U21.1"
                     /codon_start=1
                     /product="heterogeneous nuclear ribonucleoprotein U
                     (scaffold attachment factor A)"
                     /protein_id="AAH03367.1"
                     /db_xref="GeneID:3192"
                     /db_xref="HGNC:HGNC:5048"
                     /db_xref="MIM:602869"
                     /translation="MSSSPVNVKKLKVSELKEELKKRRLSDKGLKAELMERLQAALDD
                     EEAGGRPAMEPGNGSLDLGGDSAGRSGAGLEQEAAAGGDEEEEEEEEEEEGISALDGD
                     QMELGEENGAAGAADSGPMEEEEAASEDENGDDQGFQEGEDELGDEEEGAGDENGHGE
                     QQPQPPATQQQQPQQQRGAAKEAAGKSSGPTSLFAVTVAPPGARQGQQQAGGDGKTEQ
                     KGGDKKRGVKRPREDHGRGYFEYIEENKYSRAKSPQPPVEEEDEHFDDTVVCLDTYNC
                     DLHFKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKD
                     IDIHEVRIGWSLTTSGMLLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFAN
                     FESDEVELSYAKNGQDLGVAFKISKEVLAGRPLFPHVLCHNCAVEFNFGQKEKPYFPI
                     PEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTTWVTKHAAENPGKYNI
                     LGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAARKKRNFILDQTNVS
                     AAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEHAVLKMKGNFTLP
                     EVAECFDEITYVELQKEEAQKLLEQYKEESKKALPPEKKQNTGSKKSNKNKSGKNQFN
                     RGGGHRGRGGFNMRGGNFRGGAPGNRGGYNRRGNMPQRGGGGGGSGGIGYPYPRAPVF
                     PGRGSYSNRGNYNRGGMPNRGNYNQNFRGRGNNRGYKNQSQGYNQWQQGQFWGQKPWS
                     QHYHQGYY"
BASE COUNT         1045 a          654 c          928 g          769 t
ORIGIN      
        1 ggcggatccg ctctgcagca cgaacccatc tccagccgca gccgcagccg ccgcccgggc
       61 cgaggagcag ccgcagcagc cgccaccagt ggccgagtga gcggagccga gtttgaggca
      121 gcgcctagcg gtgaatcggg gccctcacca tgagttcctc gcctgttaat gtaaaaaagc
      181 tgaaggtgtc ggagctgaaa gaggagctca agaagcgacg cctttctgac aagggtctca
      241 aggccgagct catggagcga ctccaggctg cgctggacga cgaggaggcc gggggccgcc
      301 ccgccatgga gcccgggaac ggcagcctag acctgggcgg ggattccgct gggcgctcgg
      361 gagcaggcct cgagcaggag gccgcggccg gcggcgatga agaggaggag gaagaggaag
      421 aggaggagga aggaatctcc gctctggacg gcgaccagat ggagctagga gaggagaacg
      481 gggccgcggg ggcggccgac tcgggcccga tggaggagga ggaggccgcc tcggaagacg
      541 agaacggcga cgatcagggt ttccaggaag gggaagatga gctcggggac gaagaggaag
      601 gcgcgggcga cgagaacggg cacggggagc agcagcctca accgccggcg acgcagcagc
      661 aacagcccca acagcagcgc ggggccgcca aggaggccgc ggggaagagc agcggcccca
      721 cctcgctgtt cgcggtgacg gtggcgccgc ccggggcgag gcagggccag cagcaggcgg
      781 gaggggacgg caaaacagaa cagaaaggcg gagataaaaa gaggggtgtt aaaagaccac
      841 gagaagatca tggccgtgga tattttgagt acattgaaga gaacaagtat agcagagcca
      901 aatctcctca gccacctgtt gaagaagaag atgaacactt cgatgacaca gtggtttgtc
      961 ttgatactta taattgtgat ctacatttta aaatatcaag agatcgtctc agtgcttctt
     1021 cccttacaat ggagagtttt gcttttcttt gggctggagg aagagcatcc tatggtgtgt
     1081 caaaaggcaa agtgtgtttt gagatgaagg ttacagagaa gatcccagta aggcatttat
     1141 atacaaaaga tattgacata catgaagttc gtattggctg gtcactaact acaagtggaa
     1201 tgttacttgg tgaagaagaa ttttcttatg ggtattctct aaaaggaata aaaacatgca
     1261 actgtgagac tgaagattat ggagaaaagt ttgatgaaaa tgatgtgatt acatgttttg
     1321 ctaactttga aagtgatgaa gtagaactct cgtatgctaa gaatggacaa gatcttggcg
     1381 ttgccttcaa aatcagtaag gaagttcttg ctggacggcc actgttcccg catgttctct
     1441 gccacaactg tgcagttgaa tttaattttg gtcagaagga aaagccatat tttccaatac
     1501 ctgaagagta tactttcatc cagaacgtcc ccttagagga tcgagttaga ggaccaaagg
     1561 ggcctgaaga gaagaaagat tgtgaagttg tgatgatgat tggcttgcca ggagctggaa
     1621 aaactacctg ggttactaaa catgcagcag aaaatccagg gaaatataac attcttggca
     1681 caaatactat tatggataag atgatggtgg caggttttaa gaagcaaatg gcagatactg
     1741 gaaaactgaa cacactgttg cagagagccc cccagtgtct tgggaaattt attgagattg
     1801 ctgcccgaaa gaagcgaaat tttattctgg atcagacaaa tgtgtctgct gctgcccaga
     1861 ggagaaaaat gtgcctgttt gcaggcttcc agcgaaaagc tgttgtagtt tgcccaaaag
     1921 atgaagacta taagcaaaga acacagaaga aagcagaagt agaggggaaa gacctaccag
     1981 aacatgcggt cctcaaaatg aaaggaaact ttaccctccc agaggtagct gagtgctttg
     2041 atgaaataac ctatgttgaa cttcagaagg aagaagccca aaaactcttg gagcaatata
     2101 aggaagaaag caaaaaggct cttccaccag aaaagaaaca gaacactggc tcaaagaaaa
     2161 gcaataaaaa taagagtggc aagaaccagt ttaacagagg tggtggccat agaggacgtg
     2221 gaggattcaa tatgcgtggt ggaaatttca gaggaggagc ccctgggaat cgtggcggat
     2281 ataataggag gggcaacatg ccacagagag gtggtggcgg tggaggaagt ggtggaatcg
     2341 gctatccata ccctcgtgcc cctgtttttc ctggccgtgg tagttactca aacagaggga
     2401 actacaacag aggtggaatg cccaacagag ggaactacaa ccagaacttc agaggacgag
     2461 gaaacaatcg tggctacaaa aatcaatctc agggctacaa ccagtggcag cagggtcaat
     2521 tctggggtca gaagccatgg agtcagcatt atcaccaagg atattattga atacccaaat
     2581 aaaacgaact gatacatatt tctccaaaac cttcacaaga agtcgactgt tttctttagt
     2641 aggctaactt tttaaacatt ccacaagagg aagtgcctgc gggttccttt tttagaagct
     2701 ttgtgggttg attttttttc ttttcttttt tgtacatttt taattgcagt ttaaaagtga
     2761 atcgtaagag aacctcagca ttgtgcacga taagagaatg tgtcagtatt tcagggttct
     2821 acattttatc tgtaaaatgt gacttttttt tttttttatc acaacagaag taaaatgttg
     2881 ctttgtacct ggtgtctttt attaagaatt tactcccccc atttctcaca gagaataaca
     2941 gtcgggagtc attgtcacaa tataatagaa atgttagcaa ccagattcat gtaaggacta
     3001 agtggtcctc atgaattgca ttaagactct gtactgctca tattacactc catcctctct
     3061 gtagtttgct gggtagtgga gggggtaagc taaatcatag tttctgacaa taactgggaa
     3121 ggttttttct taaaataaca atggaattgg tataattggg attgaaaact aaaacttgga
     3181 actaagatag agaagatgga gtgtatgtag aagggctgtt aaaaatgtaa aacttggttg
     3241 cattatttgt ggaggctcaa acttgtgaag gttaatacca taatttttcc atttgttctg
     3301 cattttgatt ctgaaaagaa agctggcttt gcccatttct tattaaaaaa acttgttgta
     3361 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//