LOCUS BC003360 2412 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 18, mRNA (cDNA
clone MGC:5316 IMAGE:2900252), complete cds.
ACCESSION BC003360
VERSION BC003360.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2412)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2412)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: k Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38327633.
FEATURES Location/Qualifiers
source 1..2412
/db_xref="H-InvDB:HIT000031515"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5316 IMAGE:2900252"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2412
/gene="DDX18"
/gene_synonym="MrDb"
/db_xref="GeneID:8886"
/db_xref="HGNC:HGNC:2741"
/db_xref="MIM:606355"
CDS 59..2071
/gene="DDX18"
/gene_synonym="MrDb"
/codon_start=1
/product="DEAD (Asp-Glu-Ala-Asp) box polypeptide 18"
/protein_id="AAH03360.1"
/db_xref="GeneID:8886"
/db_xref="HGNC:HGNC:2741"
/db_xref="MIM:606355"
/translation="MSHLPMKLLRKKIEKRNLKLRQRNLKFQGASNLTLSETQNGDVS
EETMGSRKVKKSKQKPMNVGLSETQNGGMSQEAVGNIKVTKSPQKSTVLSNGEAAMQS
SNSESKKKKKKKRKMVNDAEPDTKKAKTENKGKSEEESAETTKETENNVEKPDNDEDE
SEVPSLPLGLTGAFEDTSFASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRD
LLAAAKTGSGKTLAFLIPAVELIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMT
HHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDE
ADRILDVGFEEELKQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDK
ANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYIDL
PVLAIHGKQKQNKRTTTFFQFCNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKE
YIHRVGRTARGLNGRGHALLILRPEELGFLRYLKQSKVPLSEFDFSWSKISDIQSQLE
KLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLN
VNSNEGKQKKRGGGGGFGYQKTKKVEKSKIFKHISKKSSDSRQFSH"
BASE COUNT 774 a 457 c 522 g 659 t
ORIGIN
1 gtccggaact gagtagctgt actgtgtggc gccttattct aggcacttgt tgggcagaat
61 gtcacacctg ccgatgaaac tcctgcgtaa gaagatcgag aagcggaacc tcaaattgcg
121 gcagcggaac ctaaagtttc agggggcctc aaatctgacc ctatcggaaa ctcaaaatgg
181 agatgtatct gaagaaacaa tgggaagtag aaaggttaaa aaatcaaaac aaaagcccat
241 gaatgtgggc ttatcagaaa ctcaaaatgg aggcatgtct caagaagcag tgggaaatat
301 aaaagttaca aagtctcccc agaaatccac tgtattaagc aatggagaag cagcaatgca
361 gtcttccaat tcagaatcaa aaaagaaaaa gaagaaaaag agaaaaatgg tgaatgatgc
421 tgagcctgat acgaaaaaag caaaaactga aaacaaaggg aaatctgaag aagaaagtgc
481 cgagactact aaagaaacag aaaataatgt ggagaagcca gataatgatg aagatgagag
541 tgaggtgccc agtctgcccc tgggactgac aggagctttt gaggatactt cgtttgcttc
601 tctatgtaat cttgtcaatg aaaacactct gaaggcaata aaagaaatgg gttttacaaa
661 catgactgaa attcagcata aaagtatcag accacttctg gaaggcaggg atcttctagc
721 agctgcaaaa acaggcagtg gtaaaaccct ggcttttctc atccctgcag ttgaactcat
781 tgttaagtta aggttcatgc ccaggaatgg aacaggagtc cttattctct cacctactag
841 agaactagcc atgcaaacct ttggtgttct taaggagctg atgactcacc acgtgcatac
901 ctatggcttg ataatgggtg gcagtaacag atctgctgaa gcacagaaac ttggtaatgg
961 gatcaacatc attgtggcca caccaggccg tctgctggac catatgcaga ataccccagg
1021 atttatgtat aaaaacctgc agtgtctggt tattgatgaa gctgatcgta tcttggatgt
1081 ggggtttgaa gaggaattaa agcaaattat taaacttttg ccaacacgta gacagactat
1141 gctcttttct gccacccaaa ctcgaaaagt tgaagacctg gcaaggattt ctctgaaaaa
1201 ggagccattg tatgttggcg ttgatgatga taaagcgaat gcaacagtgg atggtcttga
1261 acagggatat gttgtttgtc cttctgaaaa gagattcctt ctgctcttta cattccttaa
1321 gaagaaccga aagaagaagc ttatggtctt cttttcatct tgtatgtctg tgaaatacca
1381 ctatgagttg ctgaactaca ttgatttgcc cgtcttggcc attcatggaa agcaaaagca
1441 aaataagcgt acaaccacat tcttccagtt ctgcaatgca gattcgggaa cactattgtg
1501 tacggatgtg gcagcgagag gactagacat tcctgaagtc gactggattg ttcagtatga
1561 ccctccggat gaccctaagg aatatattca tcgtgtgggt agaacagcca gaggcctaaa
1621 tgggagaggg catgccttgc tcattttgcg cccagaagaa ttgggttttc ttcgctactt
1681 gaaacaatcc aaggttccat taagtgaatt tgacttttcc tggtctaaaa tttctgacat
1741 tcagtctcag cttgagaaat tgattgaaaa gaattacttt cttcataagt cagcccagga
1801 agcatataag tcatacatac gagcctatga ttcccattct ctgaaacaga tctttaatgt
1861 taataaccta aatttgcctc aggttgctct gtcatttggt ttcaaggtgc ctcccttcgt
1921 tgatctgaac gtcaacagta atgaaggcaa gcagaaaaag cgaggaggtg gtggtggatt
1981 tggctaccag aaaaccaaga aagttgagaa atccaaaatc tttaaacaca ttagcaagaa
2041 atcatctgac agcaggcagt tctctcactg aacacatgcc ttcctttcat cttgaataac
2101 tttgtcctaa aatgaatttt ttttcccctt gatttaacag gatttttgta gactttagaa
2161 tttggactta cctaacaaga gtataaattg acttgggttg caagcactga gcactgttac
2221 ttctatcacg tctctctttt atttctggga tataaaacag gctttaagtt tcttggttgc
2281 ccaagggcag agcaaggaat atctggtgtt tcttgtgatg ataatatttt aattttaaat
2341 atccctccct catacaagtg tatgttacca ttttaatata attctttttg tatctttaaa
2401 aaaaaaaaaa aa
//