LOCUS BC003181 2500 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens DPH2 homolog (S. cerevisiae), mRNA (cDNA clone
MGC:4428 IMAGE:2958202), complete cds.
ACCESSION BC003181
VERSION BC003181.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2500)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2500)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: h Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41352701.
FEATURES Location/Qualifiers
source 1..2500
/db_xref="H-InvDB:HIT000031495"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4428 IMAGE:2958202"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2500
/gene="DPH2"
/db_xref="GeneID:1802"
/db_xref="HGNC:HGNC:3004"
/db_xref="MIM:603456"
CDS 173..1642
/gene="DPH2"
/codon_start=1
/product="DPH2 homolog (S. cerevisiae)"
/protein_id="AAH03181.1"
/db_xref="GeneID:1802"
/db_xref="HGNC:HGNC:3004"
/db_xref="MIM:603456"
/translation="MESMFSSPAEAALQRETGVPGLLTPLPDLDGVYELERVAGFVRD
LGCERVALQFPDQLLGDAVAVAARLEETTGSKMFILGDTAYGSCCVDVLGAEQAGAQA
LIHFGPACLSPPARPLPVAFVLRQRSVALELCVKAFEAQNPDPKAPVVLLSEPACAHA
LEALATLLRPRYLDLLVSSPAFPQPVGSLSPEPMPLERFGRRFPLAPGRRLEEYGAFY
VGGSKASPDPDLDPDLSRLLLGWAPGQPFSSCCPDTGKTQDEGARAGRLRARRRYLVE
RARDARVVGLLAGTLGVAQHREALAHLRNLTQAAGKRSYVLALGRPTPAKLANFPEVD
VFVLLACPLGALAPQLSGSFFQPILAPCELEAACNPAWPPPGLAPHLTHYADLLPGSP
FHVALPPPESELWETPDVSLITGDLRPPPAWKSSNDHGSLALTPRPQLELAESSPAAS
FLSSRSWQGLEPRLGQTPVTEAVSGRRGIAIAYEDEGSG"
BASE COUNT 527 a 719 c 696 g 558 t
ORIGIN
1 agaaacagta gttaggatgg ctgaagggga tactcaccgg ctgaaggccg actgtgattc
61 cccctacccc cacaaggcga ttttgacccc ctgagggctg ctctagagga ctcaggcccc
121 gaagctgtcc cagggaggtc cccgctgcat cccaccaccc aagctgtgcc tcatggagtc
181 gatgtttagc agccctgccg aggcggcgct gcagcgagag accggggtgc caggactgct
241 tactcctctt ccggacctgg acggagtgta cgagctggag cgagtcgctg gatttgtccg
301 cgacctgggg tgtgaacgag ttgccttgca gttccctgac cagctattgg gagatgctgt
361 ggctgtggct gcacgactgg aggagacgac agggtcaaag atgttcattc tgggtgacac
421 agcctacggc agctgctgcg tggatgtgct gggtgctgag caagctggag ctcaggctct
481 catacatttt ggccctgcct gcttaagccc tccagcccgc ccactgcccg ttgccttcgt
541 gcttcgtcaa cgttctgtgg ccttggagct ctgtgtcaag gcctttgagg cccagaaccc
601 agaccccaaa gcgcctgtgg tgctgctgag tgagccggcc tgtgcccatg ccctggaggc
661 tttggctact ctcctgcgcc cacggtacct ggacctgcta gtctccagcc cagcttttcc
721 ccaaccagtg ggttccctga gtccagagcc tatgccccta gagcgttttg ggcgccgctt
781 cccccttgcc ccagggaggc gtctagaaga gtatggtgcc ttctatgtag ggggctctaa
841 ggccagccct gacccagacc ttgacccaga cctgagtcgg ctgctcttgg ggtgggcacc
901 aggtcaaccc ttctcctcct gctgtccaga tacagggaag actcaggatg agggtgcccg
961 ggctggacgg ctaagggcac gaagacgata tctggtagag agggccagag atgcccgcgt
1021 ggtagggctg ctggcaggca cactgggtgt agcccaacac cgtgaggcac tggcccactt
1081 gcggaacctg actcaggctg ctggcaagcg tagctatgtg ttggccctgg ggcggcccac
1141 ccctgccaag cttgccaact tccctgaggt ggatgtcttt gtgctattag cctgtcctct
1201 gggtgctcta gccccccagc tttctggtag cttcttccag cctatactgg caccatgtga
1261 gctggaagct gcctgcaacc ctgcctggcc acctccaggc ctggctcccc acctcacaca
1321 ttatgcggac ttattgcctg gctctccctt ccacgtggct ctcccaccac ctgagtcaga
1381 gctgtgggaa accccagacg tgtcactcat tactggagat ctccgacccc cacctgcctg
1441 gaagtcatca aatgatcatg gaagcttggc tctgacccca cggccccagc tggagctggc
1501 tgagagcagt cctgcagcct cattccttag ttcccggagc tggcaagggc tggagccccg
1561 cctgggtcag acgccagtga cagaagctgt gagtggaaga cgagggattg ccatcgccta
1621 tgaggatgag ggaagcggct gataccatgt ggggctggag acatagatgg acttatgaat
1681 ggctgctagg acctttagtg ctccctgcac caacctccca tccccctgcc aagatccttg
1741 aaggaccctg gaaggaggga gagcaggcag cccttcacag gataggatcc gtctctgtcc
1801 tgtcctggca ctggcacaag ctcagcccat gcccagtaat gcgtgttgtt tggctgatgg
1861 aataaagggc ttagggactt ccctgaggcc tctggaccca tctgtcttcc tgagggcagc
1921 ccaggacctt tggccaatcc cagttcccag gctgcagttg agggtctgtc cttgtcaaaa
1981 ggcaggtgct agacagtcta gaccagggtt tctcaaactc gtacttgaca tttggggcca
2041 gataattctt tgttgtgggg ctgtctggtg tatggtaggg tgctcagcag catccctggc
2101 ctctgcccac tagacatcag aagcactccc ccagttgtga caaccaaaaa tatctccaga
2161 ccttggcaaa tgttatctgt gggggaaaat tgccctcaat tgagaaccac tggtctagct
2221 agacctgcac tgtccagtac agtagccact aaatacatgt ggctaaactt aaatttaagt
2281 taattaagat taaaagctca gtttctcagt cacattagtc attcaagtgt tcagacagcc
2341 acatgagggg acagtgcagc tacaggatat gccatcatgg cagaaagttc tgttggttgg
2401 acagctttgg tctatactga ctcttatttc tcagggagat cacagcaacc taaataaacc
2461 agataccttt tcaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//