LOCUS       BC003180                1345 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens small nuclear ribonucleoprotein polypeptide N, mRNA
            (cDNA clone MGC:4420 IMAGE:2958068), complete cds.
ACCESSION   BC003180
VERSION     BC003180.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1345)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1345)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-FEB-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: DCTD/DTP
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 9 Row: p Column: 14
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 29540556.
FEATURES             Location/Qualifiers
     source          1..1345
                     /db_xref="H-InvDB:HIT000031494"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:4420 IMAGE:2958068"
                     /tissue_type="Kidney, renal cell adenocarcinoma"
                     /clone_lib="NIH_MGC_14"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..1345
                     /gene="SNRPN"
                     /gene_synonym="HCERN3"
                     /gene_synonym="RT-LI"
                     /gene_synonym="SM-D"
                     /gene_synonym="SMN"
                     /gene_synonym="SNRNP-N"
                     /gene_synonym="SNURF-SNRPN"
                     /db_xref="GeneID:6638"
                     /db_xref="HGNC:HGNC:11164"
                     /db_xref="MIM:182279"
     CDS             467..1189
                     /gene="SNRPN"
                     /gene_synonym="HCERN3"
                     /gene_synonym="RT-LI"
                     /gene_synonym="SM-D"
                     /gene_synonym="SMN"
                     /gene_synonym="SNRNP-N"
                     /gene_synonym="SNURF-SNRPN"
                     /codon_start=1
                     /product="small nuclear ribonucleoprotein polypeptide N"
                     /protein_id="AAH03180.1"
                     /db_xref="GeneID:6638"
                     /db_xref="HGNC:HGNC:11164"
                     /db_xref="MIM:182279"
                     /translation="MTVGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCD
                     CDEFRKIKPKNAKQPEREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAG
                     GPGVGRAAGRGVPAGVPIPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAVAATAS
                     IAGAPTQYPPGRGTPPPPVGRATPPPGIMAPPPGMRPPMGPPIGLPPARGTPIGMPPP
                     GMRPPPPGIRGPPPPGMRPPRP"
BASE COUNT          344 a          343 c          359 g          299 t
ORIGIN      
        1 aattcggcac agggccgccg gagatgcctg acgcatctgt ctgaggagcg gtcagtgacg
       61 cgatggagcg ggcaagggat cgcttacacc tgagacgaac tacagaacag cacgtaccag
      121 aggtggaagt ccaagtcaaa cgcagaagga ctgcctcact gagcaaccaa gagtgtcagt
      181 tgtacccgag gcgttctcag cagcagcaag tacctgtggt ggatttccag gctgaactga
      241 ggcaggcatt cttagctgag acaccaagag gtggttaaag ccatattgga gtagcgagga
      301 atctgattcc aagcaaaaac caggctccat ctactctttg aagcttctgc ccagcttgca
      361 ttgtttctag gagaacccgc gtcatacctt tatctatagc cttcccctag gtcttcagaa
      421 gcatcaagtt ttaactgtgg acattggatt tggtggaaca gcaatcatga ctgttggcaa
      481 gagtagcaag atgctgcagc acattgacta tagaatgaga tgtatcctgc aagatggccg
      541 aatcttcatt ggcaccttta aggcttttga caagcatatg aatttgatcc tctgtgattg
      601 tgatgagttc agaaagatca agccaaagaa tgcgaagcaa ccagagcgtg aagaaaagcg
      661 ggttttgggt ctggtgttgc tgcgtgggga gaacttggta tccatgactg tggaggggcc
      721 accccccaaa gatactggca ttgctcgggt accacttgct ggagctgctg gaggccctgg
      781 ggttggtagg gcagctggta gaggagtacc agctggtgtg ccaattcccc aggcccctgc
      841 tggattggca ggccctgtcc gaggagttgg gggaccatcc cagcaggtaa tgactccaca
      901 gggaagaggc actgtagcag ctgctgctgt tgctgcgact gccagtattg ctggagcccc
      961 aacacagtac ccaccaggac ggggcactcc gcccccaccc gtcggcagag caaccccacc
     1021 tccaggcatt atggctcctc cacctggtat gagaccaccc atgggcccac caattgggct
     1081 tccccctgct cgagggacgc caataggcat gccgcctccg ggaatgagac cccctccacc
     1141 aggcattaga ggtccacctc ccccaggaat gcgtccacca agaccttagc atactgttga
     1201 tccatctcag tcactttttc ccctgcaatg cgtcttgtga aattgtgtag agtgtttgtg
     1261 agctttttgt tccctcattc tgcattaata atagctaata ataaatgcat agagcaatta
     1321 aactgtgaaa aaaaaaaaaa aaaaa
//