LOCUS BC003170 3889 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens ubiquitin associated protein 2-like, mRNA (cDNA clone MGC:4404 IMAGE:2906083), complete cds. ACCESSION BC003170 VERSION BC003170.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3889) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3889) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 9 Row: f Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40254860. FEATURES Location/Qualifiers source 1..3889 /db_xref="H-InvDB:HIT000031487" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:4404 IMAGE:2906083" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3889 /gene="UBAP2L" /gene_synonym="KIAA0144" /gene_synonym="NICE-4" /db_xref="GeneID:9898" /db_xref="HGNC:HGNC:29877" CDS 50..3313 /gene="UBAP2L" /gene_synonym="KIAA0144" /gene_synonym="NICE-4" /codon_start=1 /product="ubiquitin associated protein 2-like" /protein_id="AAH03170.1" /db_xref="GeneID:9898" /db_xref="HGNC:HGNC:29877" /translation="MMTSVGTNRARGNWEQPQNQNQTQHKQRPQATAEQIRLAQMISD HNDADFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGKK KGVSGQKDGGQTESNEEGKENRDRDRDYSRRRGGPPRRGRGASRGREFRGQENGLDGT KSGGPSGRGTERGRRGRGRGRGGSGRRGGRFSAQGMGTFNPADYAEPANTDDNYGNSS GNTWNNTGHFEPDDGTSAWRTATEEWGTEDWNEDLSETKIFTASNVSSVPLPAENVTI TAGQRIDLAVLLGKTPSTMENDSSNLDPSQAPSLAQPLVFSNSKQTAISQPASGNTFS HHSMVSMLGKGFGDVGEAKGGSTTGSQFLEQFKTAQALAQLAAQHSQSGSTTTSSWDM GSTTQSPSLVQYDLKNPSDSAVHSPFTKRQAFTPSSTMMEVFLQEKSPAVATSTAAPP PPSSPLPSKSTSAPQMSPGSSDNQSSSPQPAHQKLKQQKKKASLTSKIPALAVEMPGS ADISGLNLQFGALQFGSEPVLSDYESTPTTSASSSQAPSSLYTSTASESSSTISSNQS QESGYQSGPIQSTTYTSQNNAQGPLYEQRSTQTRRYPSSISSSPQKDLTQAKNGFSSV QATQLQTTQSVEGATGSAVKSDSPSTSSIPPLNETVSAASLLTTTNQHSSSLGGLSHS EEIPNTTTTQHSSTLSTQQNTLSSSTSSGRTSTSTLLHTSVESEANLHSSSSTFSTTS STVSAPPPVVSVSSSLNSGSSLGLSLGSNSTVTASTRSSVATTSGKAPPNLPPGVPPL LPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRFPLDYYSIPFPTPTTPLTGRDGSLASN PYSGDLTKFGRGDASSPAPATTLAQPQQNQTQTHHTTQQTFLNPALPPGYSYTSLPYY TGVPGLPSTFQYGPAVFPVAPTSSKQHGVNVSVNASATPFQQPSGYGSHGYNTGVSVT SSNTGVPDISGSVYSKTQQSFEKQGFHSGTPAASFNLPSALGSGGPINPATAAAYPPA PFMHILTPHQQPHSQILHHHLQQDGQTGSGQRSQTSSIPQKPQTNKSAYNSYSWGAN" BASE COUNT 993 a 1102 c 891 g 903 t ORIGIN 1 gagactgagt attctacctt gtaaatactg ttatttgtat atactgtaaa tgatgacatc 61 ggtgggcact aaccgagccc ggggaaactg ggaacaacct caaaaccaaa accagacaca 121 gcacaagcag cggccacagg ccactgcaga acaaattaga cttgcacaga tgatttcgga 181 ccataatgat gctgactttg aggagaaggt gaaacaattg attgatatta caggcaagaa 241 ccaggatgaa tgtgtgattg ctttgcatga ctgcaatgga gatgtcaaca gagctatcaa 301 tgttcttctg gaaggaaacc cagacacgca ttcctgggag atggtcggga agaagaaggg 361 agtctcaggc cagaaggatg gtggccagac ggaatccaat gaggaaggca aagaaaatcg 421 agaccgggac agagactata gtcggcgacg tggtgggcca ccaagacggg ggagaggtgc 481 cagccgtgga cgagagtttc gaggtcagga aaatggattg gatggcacca agagtggagg 541 gccttctgga agaggaacag aaagaggcag aaggggccgt ggccgaggca gaggtggctc 601 tggtaggcga ggaggaaggt tttctgctca aggaatggga acctttaacc cagctgatta 661 tgcagagcca gccaatactg atgataacta tggcaatagc agcggcaata cgtggaacaa 721 cactggccac tttgaaccag atgatgggac gagtgcatgg aggactgcaa cagaggagtg 781 ggggactgaa gattggaatg aagatctttc tgagaccaag atcttcactg cctctaatgt 841 gtcttcagtg cctctgcctg cggagaatgt gacaatcact gctggtcaga gaattgacct 901 tgctgttctg ctggggaaga caccatctac aatggagaat gattcatcta atctggatcc 961 gtctcaggct ccttctctgg cccagcctct ggtgttcagt aattcgaagc agactgccat 1021 atcacagcct gcttcaggga acacattttc tcatcacagt atggtgagca tgttagggaa 1081 aggatttggt gatgtcggtg aagctaaagg cggcagtact acaggctccc agttcttgga 1141 gcaattcaag actgcccaag ccctggctca gttggcagct cagcattctc agtctggaag 1201 caccaccacc tcctcttggg acatgggctc gacgacacaa tccccatcac tggtgcagta 1261 tgatttgaag aacccaagtg attcagcagt gcacagcccc tttacaaagc gccaggcttt 1321 taccccatct tcaaccatga tggaggtgtt ccttcaggag aagtcacctg cagtggctac 1381 ctccacagct gcacctccac ctccgtcttc tcctctgcca agcaaatcca catcggctcc 1441 acagatgtcg cctggatctt cagacaacca gtcctctagc cctcagccgg ctcaccagaa 1501 actgaaacag cagaagaaaa aagcctcctt gacttctaag attcctgctc tggctgtgga 1561 gatgcctggc tcagcagata tctcagggct aaacctgcag tttggggcat tgcagtttgg 1621 gtcagagcct gtcctttctg attatgagtc cacccccacc acgagcgcct cttcaagcca 1681 ggctccaagt agcctgtata ccagcacggc cagtgaatca tcctctacaa tttcatctaa 1741 ccagagtcag gagtctggtt atcagagcgg cccaattcag tcgacaacct atacctccca 1801 aaataatgct cagggccctc tttatgaaca gagatccaca cagactcggc ggtaccccag 1861 ctccatctct tcatcacccc aaaaggacct gactcaggca aagaatggct tcagttctgt 1921 gcaggccacg cagttacaga ccacacaatc tgttgaaggt gctacaggct ctgcagtgaa 1981 atctgattca ccttccactt ctagcatccc ccctctcaat gaaacggtat ctgcagcttc 2041 cttactgacg acaaccaatc agcattcatc ctccttgggt ggcttgagcc acagtgagga 2101 gattccaaat actaccacca cacaacacag cagcacgtta tctacgcagc agaataccct 2161 ttcatcatca acatcttctg ggcgcacttc gacatccact cttttgcaca caagtgtgga 2221 gagtgaggcg aatctccatt cttcctccag cactttttcc accacatcca gcacagtctc 2281 tgcacctccc ccagtggtca gtgtctcctc cagtctcaat agtggcagta gcctgggcct 2341 cagcctaggc agcaactcca ctgtcacagc ctcgactcga agctcagttg ctacgacttc 2401 aggaaaagct cctcccaacc tccctcctgg ggtcccgccg ttgttgccta atccgtatat 2461 tatggctcca gggctgttac atgcctaccc gccacaagta tatggttatg atgacttgca 2521 gatgcttcag acaagatttc cattggatta ctacagcatc ccatttccca cacccactac 2581 tccgctgact gggagggatg gtagcctggc cagcaaccct tattctggtg acctcacaaa 2641 gttcggccgt ggggatgcct cctccccagc cccggccaca accttggccc aaccccaaca 2701 gaaccagacg cagactcacc ataccacgca gcagacattc ctgaacccgg cgctgcctcc 2761 tggctacagt tacaccagcc tgccatacta tacaggggtc ccgggcctcc ccagcacctt 2821 ccagtatggg cctgctgtgt tccctgtggc tcctacctct tccaagcagc atggtgtgaa 2881 tgtcagtgtg aatgcatcgg ccaccccttt ccaacagccg agtggatatg ggtctcatgg 2941 atacaacact ggtgtttcag tcacctccag taacacgggc gtgccagata tctcgggttc 3001 tgtgtactcc aaaacccagc agtcctttga gaaacaaggt tttcattccg gtactcctgc 3061 tgcttccttc aacttgcctt cagccctagg aagtgggggc cccatcaatc cggccacagc 3121 tgctgcctac ccacctgccc cctttatgca cattctgacc ccccatcagc agccgcattc 3181 tcagatcctt caccatcacc tgcagcagga tggccagacg ggcagcgggc aacgtagcca 3241 gaccagctcc atcccgcaga agccccagac caacaagtct gcctacaaca gctacagctg 3301 gggggccaac tgaggccctg accctcttct cccggtccca tcttctgaga gggcttctca 3361 gcctggaaac tatggaaaca gcatcaaaga gaaaggaatg tggggggttt ccgctgcccc 3421 ccacccccag cggcccaccc catgcctcag cttcatgtct gtcccattcc tataccatcc 3481 ccaccctgtt gtatgtatta taggatttgt attttctcct tttttttccc ccttccattc 3541 cttctcccct cttgcattca agattatgaa actttgctat gggccctgca cttcctttgc 3601 ttcctcctgt tcaccctggt ggtgtacgga tgaggcgggg aggtgggacc cccaaacata 3661 tatcagccca acagccctaa gtctccttct ttattattag gaaaacaaca acaacaacaa 3721 acaaaaaaat ggcgtcatga atatgaacag cattgtcaga tgaattagtt gaagtggttt 3781 tttttttgtt tttttttttt tttttgtact gtgtcctcaa atttaatgga ttaatgtgtc 3841 ttgtatatat aaaaagaaaa cctctacctt caaaaaaaaa aaaaaaaaa //