LOCUS BC003125 3254 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens transmembrane protein 43, mRNA (cDNA clone MGC:3222 IMAGE:3503636), complete cds. ACCESSION BC003125 VERSION BC003125.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3254) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3254) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 6 Row: f Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 13236586. FEATURES Location/Qualifiers source 1..3254 /db_xref="H-InvDB:HIT000031446" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:3222 IMAGE:3503636" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3254 /gene="TMEM43" /gene_synonym="DKFZp586G1919" /gene_synonym="MGC3222" /db_xref="GeneID:79188" /db_xref="HGNC:HGNC:28472" CDS 150..1352 /gene="TMEM43" /gene_synonym="DKFZp586G1919" /gene_synonym="MGC3222" /codon_start=1 /product="transmembrane protein 43" /protein_id="AAH03125.1" /db_xref="GeneID:79188" /db_xref="HGNC:HGNC:28472" /translation="MAANYSSTSTRREHVKVKTSSQPGFLERLSETSGGMFVGLMAFL LSFYLIFTNEGRALKTATSLAEGLSLVVSPDSIHSVAPENEGRLVHIIGALRTSKLLS DPNYGVHLPAVKLRRHVEMYQWVETEESREYTEDGQVKKETRYSYNTEWRSEIINSKN FDREIGHKNPSAMAVESFMATAPFVQIGRFFLSSGLIDKVDNFKSLSLSKLEDPHVDI IRRGDFFYHSENPKYPEVGDLRVSFSYAGLSGDDPDLGPAHVVTVIARQRGDQLVPFS TKSGDTLLLLHHGDFSAEEVFHRELRSNSMKTWGLRAAGWMAMFMGLNLMTRILYTLV DWFPVFRDLVNIGLKAFAFCVATSLTLLTVAAGWLFYRPLWALLIAGLALVPILVART RVPAKKLE" BASE COUNT 817 a 814 c 784 g 839 t ORIGIN 1 ggtaactgca gtaagtcccg cttggccctg gagtccacgc ggattttcga agctggggct 61 ggcaagaggc cgctggacac cacgctccag tcgtcagccc acttcctagc tgaacagcgc 121 gaggcggcgg cagcgagccg ggtcccacca tggccgcgaa ttattccagt accagtaccc 181 ggagagaaca tgtcaaagtt aaaaccagct cccagccagg cttcctggaa cggctgagcg 241 agacctcggg tgggatgttt gtggggctca tggccttcct gctctccttc tacctaattt 301 tcaccaatga gggccgcgca ttgaagacgg caacctcatt ggctgagggg ctctcgcttg 361 tggtgtctcc cgacagcatc cacagtgtgg ctccggagaa tgaaggaagg ctggtgcaca 421 tcattggcgc cttacggaca tccaagcttt tgtctgatcc aaactatggg gtccatcttc 481 cggctgtgaa actgcggagg cacgtggaga tgtaccaatg ggtagaaact gaggagtcca 541 gggagtacac cgaggatggg caggtgaaga aggagacgag gtattcctac aacactgaat 601 ggaggtcaga aatcatcaac agcaaaaact tcgaccgaga gattggccac aaaaacccca 661 gtgccatggc agtggagtca ttcatggcaa cagccccctt tgtccaaatt ggcaggtttt 721 tcctctcgtc aggcctcatc gacaaagtcg acaacttcaa gtccctgagc ctatccaagc 781 tggaggaccc tcatgtggac atcattcgcc gtggagactt tttctaccac agcgaaaatc 841 ccaagtatcc agaggtggga gacttgcgtg tctccttttc ctatgctgga ctgagcggcg 901 atgaccctga cctgggccca gctcacgtgg tcactgtgat tgcccggcag cggggtgacc 961 agctagtccc attctccacc aagtctgggg ataccttact gctcctgcac cacggggact 1021 tctcagcaga ggaggtgttt catagagaac taaggagcaa ctccatgaag acctggggcc 1081 tgcgggcagc tggctggatg gccatgttca tgggcctcaa ccttatgaca cggatcctct 1141 acaccttggt ggactggttt cctgttttcc gagacctggt caacattggc ctgaaagcct 1201 ttgccttctg tgtggccacc tcgctgaccc tgctgaccgt ggcggctggc tggctcttct 1261 accgacccct gtgggccctc ctcattgccg gcctggccct tgtgcccatc cttgttgctc 1321 ggacacgggt gccagccaaa aagttggagt gaaaagaccc tggcacccgc ccgacacctg 1381 cgtgagccct aggatccagg tcctctctca cctctgaccc agctccatgc cagagcagga 1441 gccccggtca attttggact ctgcactccc tctcctcttc aggggccaga cttggcagca 1501 tgtgcaccag gttggtgttc accagctcat gtcttcccca catctcttct tgccagtaag 1561 cagctttggt gggcagcagc agctcatgaa tggcaagctg acagcttctc ctgctgtttc 1621 cttcctctct tggactgagt gggtacggcc agccactcag cccattggca gctgacaacg 1681 cagacacgct ctacggaggc ctgctgataa agggctcagc cttgccgtgt gctgcttctc 1741 atcactgcac acaagtgcca tgctttgcca ccaccaccaa gcacatctgt gatcctgaag 1801 ggcggccgtt agtcattact gctgagtcct gggtcaccag cagacacact gggcatggac 1861 ccctcaaagc aggcacaccc aaaacacaag tctgtggcta gaacctgatg tggtgtttaa 1921 aagagaagaa acactgaaga tgtcctgagg agaaaagctg gacatatact gggcttcaca 1981 cttatcttat ggcttggcag aatctttgta gtgtgtggga tctctgaagg ccctatttaa 2041 gtttttcttc gttactttgc tgcttcatgt gtactttcct accccaagag gaagttttct 2101 gaaataagat ttaaaaacaa aacaaaaaaa acacttaata tttcagactg ttacaggaaa 2161 caccctttag tctgtcagtt gaattcagag cactgaaagg tgttaaattg gggtatgtgg 2221 tttgattgat aaaaagttac ctctcagtat tttgtgtcac tgagaagctt tacaatggat 2281 gcttttgaaa caagtatcag caaaaggatt tgttttcact ctgggaggag agggtggaga 2341 aagcacttgc tttcatcctc tggcatcgga aactccccta tgcacttgaa gatggtttaa 2401 aagattaaag aaacgattaa gagaaaaggt tggaagcttt atactaaatg ggctccttca 2461 tggtgacgcc ccgtcaacca caatcaagaa ctgaggcctg aggctggttg tacaatgccc 2521 acgcctgcct ggctgctttc acctgggagt gctttcgatg tgggcacctg ggcttcctag 2581 ggctgcttct gagtggttct ttcacgtgtt gtgtccatag ctttagtctt cctaaataag 2641 atccacccac acctaagtca cagaatttct aagttcccca actactctca caccctttta 2701 aagataaagt atgttgtaac caggatgtct taaatgattc tttgtgtacc ttttctgtca 2761 tattcagaaa ccgttttgtg cctgctggga gtaattcctt tagcaattaa gtatttggta 2821 gctgaataag gggtcagaac ttctgaaacc agagatctgt aatcatctct attggcctgg 2881 ggtgcctgtg ctataaatga gtttcttcac atgaaaaaca cagccagccc aagatgactt 2941 atctgggttt aggattcaat agtattcact aactgcttat tacatgagca atttcatcaa 3001 atctccaaac tcttaaagga tgctttcgga aaacacgctg tatacctaga tgatgactaa 3061 atgcaaaatc cttgggcttt ggtttttttc tagtaaggat tttaaataac tgccgacttc 3121 aaaagtgttc ttaaaacgaa agataatgtt aagaaaaatt tgaaagcttt ggaaaaccaa 3181 atttgtaata tcattgtatt ttttattaaa agttttgtaa taaatttcta aattataaaa 3241 aaaaaaaaaa aaaa //