LOCUS       BC003105                1329 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens protein tyrosine phosphatase type IVA, member 3, mRNA
            (cDNA clone MGC:1950 IMAGE:3357244), complete cds.
ACCESSION   BC003105
VERSION     BC003105.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1329)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1329)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-FEB-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 6 Row: a Column: 14
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 14589853.
FEATURES             Location/Qualifiers
     source          1..1329
                     /db_xref="H-InvDB:HIT000031433"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:1950 IMAGE:3357244"
                     /tissue_type="Eye, retinoblastoma"
                     /clone_lib="NIH_MGC_16"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..1329
                     /gene="PTP4A3"
                     /gene_synonym="PRL-3"
                     /gene_synonym="PRL-R"
                     /gene_synonym="PRL3"
                     /db_xref="GeneID:11156"
                     /db_xref="HGNC:HGNC:9636"
                     /db_xref="MIM:606449"
     CDS             335..781
                     /gene="PTP4A3"
                     /gene_synonym="PRL-3"
                     /gene_synonym="PRL-R"
                     /gene_synonym="PRL3"
                     /codon_start=1
                     /product="protein tyrosine phosphatase type IVA, member 3"
                     /protein_id="AAH03105.1"
                     /db_xref="GeneID:11156"
                     /db_xref="HGNC:HGNC:9636"
                     /db_xref="MIM:606449"
                     /translation="MARMNRPAPVEVSYKHMRFLITHNPTNATLSTFIEDLKKYGATT
                     VVRVCEVTYDKTPLEKDGITVVDWPFDDGAPPPGKVVEDWLSLVKAKFCEAPGSCVAV
                     HCVAGLGRKRRGAINSKQLTYLEKYRPKQRLRFKDPHTHKTRCCVM"
BASE COUNT          267 a          392 c          379 g          291 t
ORIGIN      
        1 tgactatcca gctctgagag acgggagttt ggagttgccc gctttacttt ggttgggttg
       61 gggggggcgg cgggctgttt tgttcctttt cttttttaag agttgggttt tcttttttaa
      121 ttatccaaac agtgggcagc ttcctccccc acacccaagt atttgcacaa tatttgtgcg
      181 gggtatgggg gtgggttttt aaatctcgtt tctcttggac aagcacaggg atctcgttct
      241 cctcattttt tgggggtgtg tggggacttc tcaggtcgtg tccccagcct tctctgcagt
      301 cccttctgcc ctgccgggcc cgtcgggagg cgccatggct cggatgaacc gcccggcccc
      361 ggtggaggtg agctacaaac acatgcgctt cctcatcacc cacaacccca ccaacgccac
      421 gctcagcacc ttcattgagg acctgaagaa gtacggggct accactgtgg tgcgtgtgtg
      481 tgaagtgacc tatgacaaaa cgccgctgga gaaggatggc atcaccgttg tggactggcc
      541 gtttgacgat ggggcgcccc cgcccggcaa ggtagtggaa gactggctga gcctggtgaa
      601 ggccaagttc tgtgaggccc ccggcagctg cgtggctgtg cactgcgtgg cgggcctggg
      661 ccggaagcgc cgcggagcca tcaacagcaa gcagctcacc tacctggaga aataccggcc
      721 caaacagagg ctgcggttca aagacccaca cacgcacaag acccggtgct gcgttatgta
      781 gctcaggacc ttggctgggc ctggtcgtca tgtaggtcag gaccttggct ggacctggag
      841 gccctgccca gccctgctct gcccagccca gcaggggctc caggccttgg ctggccccac
      901 atcgcctttt cctccccgac acctccgtgc acttgtgtcc gaggagcgag gagcccctcg
      961 ggccctgggt ggcctctggg ccctttctcc tgtctccgcc actccctctg gcggcgctgg
     1021 ccgtggctct gtctctctga ggtgggtcgg gcgccctctg cccgccccct cccacaccag
     1081 ccaggctggt ctcctctagc ctgtttgttg tggggtgggg gtatattttg taaccactgg
     1141 gcccccagcc cctcttttgc gaccccttgt cctgacctgt tctcggcacc ttaaattatt
     1201 agaccccggg gcagtcaggt gctccggaca cccgaaggca ataaaacagg agccgtgaaa
     1261 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1321 accctcggg
//