LOCUS BC003105 1329 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens protein tyrosine phosphatase type IVA, member 3, mRNA (cDNA clone MGC:1950 IMAGE:3357244), complete cds. ACCESSION BC003105 VERSION BC003105.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1329) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1329) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 6 Row: a Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 14589853. FEATURES Location/Qualifiers source 1..1329 /db_xref="H-InvDB:HIT000031433" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:1950 IMAGE:3357244" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1329 /gene="PTP4A3" /gene_synonym="PRL-3" /gene_synonym="PRL-R" /gene_synonym="PRL3" /db_xref="GeneID:11156" /db_xref="HGNC:HGNC:9636" /db_xref="MIM:606449" CDS 335..781 /gene="PTP4A3" /gene_synonym="PRL-3" /gene_synonym="PRL-R" /gene_synonym="PRL3" /codon_start=1 /product="protein tyrosine phosphatase type IVA, member 3" /protein_id="AAH03105.1" /db_xref="GeneID:11156" /db_xref="HGNC:HGNC:9636" /db_xref="MIM:606449" /translation="MARMNRPAPVEVSYKHMRFLITHNPTNATLSTFIEDLKKYGATT VVRVCEVTYDKTPLEKDGITVVDWPFDDGAPPPGKVVEDWLSLVKAKFCEAPGSCVAV HCVAGLGRKRRGAINSKQLTYLEKYRPKQRLRFKDPHTHKTRCCVM" BASE COUNT 267 a 392 c 379 g 291 t ORIGIN 1 tgactatcca gctctgagag acgggagttt ggagttgccc gctttacttt ggttgggttg 61 gggggggcgg cgggctgttt tgttcctttt cttttttaag agttgggttt tcttttttaa 121 ttatccaaac agtgggcagc ttcctccccc acacccaagt atttgcacaa tatttgtgcg 181 gggtatgggg gtgggttttt aaatctcgtt tctcttggac aagcacaggg atctcgttct 241 cctcattttt tgggggtgtg tggggacttc tcaggtcgtg tccccagcct tctctgcagt 301 cccttctgcc ctgccgggcc cgtcgggagg cgccatggct cggatgaacc gcccggcccc 361 ggtggaggtg agctacaaac acatgcgctt cctcatcacc cacaacccca ccaacgccac 421 gctcagcacc ttcattgagg acctgaagaa gtacggggct accactgtgg tgcgtgtgtg 481 tgaagtgacc tatgacaaaa cgccgctgga gaaggatggc atcaccgttg tggactggcc 541 gtttgacgat ggggcgcccc cgcccggcaa ggtagtggaa gactggctga gcctggtgaa 601 ggccaagttc tgtgaggccc ccggcagctg cgtggctgtg cactgcgtgg cgggcctggg 661 ccggaagcgc cgcggagcca tcaacagcaa gcagctcacc tacctggaga aataccggcc 721 caaacagagg ctgcggttca aagacccaca cacgcacaag acccggtgct gcgttatgta 781 gctcaggacc ttggctgggc ctggtcgtca tgtaggtcag gaccttggct ggacctggag 841 gccctgccca gccctgctct gcccagccca gcaggggctc caggccttgg ctggccccac 901 atcgcctttt cctccccgac acctccgtgc acttgtgtcc gaggagcgag gagcccctcg 961 ggccctgggt ggcctctggg ccctttctcc tgtctccgcc actccctctg gcggcgctgg 1021 ccgtggctct gtctctctga ggtgggtcgg gcgccctctg cccgccccct cccacaccag 1081 ccaggctggt ctcctctagc ctgtttgttg tggggtgggg gtatattttg taaccactgg 1141 gcccccagcc cctcttttgc gaccccttgt cctgacctgt tctcggcacc ttaaattatt 1201 agaccccggg gcagtcaggt gctccggaca cccgaaggca ataaaacagg agccgtgaaa 1261 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1321 accctcggg //