LOCUS BC003070 2306 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens GATA binding protein 3, mRNA (cDNA clone MGC:2346
IMAGE:3504200), complete cds.
ACCESSION BC003070
VERSION BC003070.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2306)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2306)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC003070.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: a Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50541957.
FEATURES Location/Qualifiers
source 1..2306
/db_xref="H-InvDB:HIT000031403"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2346 IMAGE:3504200"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2306
/gene="GATA3"
/gene_synonym="HDR"
/gene_synonym="MGC2346"
/gene_synonym="MGC5199"
/gene_synonym="MGC5445"
/db_xref="GeneID:2625"
/db_xref="HGNC:HGNC:4172"
/db_xref="MIM:131320"
CDS 452..1783
/gene="GATA3"
/gene_synonym="HDR"
/gene_synonym="MGC2346"
/gene_synonym="MGC5199"
/gene_synonym="MGC5445"
/codon_start=1
/product="GATA binding protein 3"
/protein_id="AAH03070.1"
/db_xref="GeneID:2625"
/db_xref="HGNC:HGNC:4172"
/db_xref="MIM:131320"
/translation="MEVTADQPRWVSHHHPAVLNGQHPDTHHPGLSHSYMDAAQYPLP
EEVDVLFNIDGQGNHVPPYYGNSVRATVQRYPPTHHGSQVCRPPLLHGSLPWLDGGKA
LGSHHTASPWNLSPFSKTSIHHGSPGPLSVYPPASSSSLSGGHASPHLFTFPPTPPKD
VSPDPSLSTPGSAGSARQDEKECLKYQVPLPDSMKLESSHSRGSMTALGGASSSTHHP
ITTYPPYVPEYSSGLFPPSSLLGGSPTGFGCKSRPKARSSTGRECVNCGATSTPLWRR
DGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTTTTTLWRRNANG
DPVCNACGLYYKLHNINRPLTMKKEGIQTRNRKMSSKSKKCKKVHDSLEDFPKNSSFN
PAALSRHMSSLSHISPFSHSSHMLTTPTPMHPPSSLSFGPHHPSSMVTAMG"
BASE COUNT 541 a 781 c 554 g 430 t
ORIGIN
1 gcgagacaga gcgagcaacg caatctgacc gagcaggtcg tacgccgccg cctcctcctc
61 ctctctgctc ttcgctaccc aggtgacccg aggagggact ccgcctccga gcggctgagg
121 accccggtgc agaggagcct ggctcgcaga attgcagagt cgtcgcccct ttttacaacc
181 tggtcccgtt ttattctgcc atacccagtt tttggatttt tgtcttcccc ttcttctctt
241 tgctaaacga cccctccaag ataattttta aaaaaccttc tcctttgctc acctttgctt
301 cccagccttc ccatcccccc accgaaagca aatcattcaa cgacccccga ccctccgacg
361 gcaggagccc cccgacctcc caggcggacc gccctccctc cccgcgcgcg ggttccgggc
421 ccggcgagag ggcgcgagca cagccgaggc catggaggtg acggcggacc agccgcgctg
481 ggtgagccac caccaccccg ccgtgctcaa cgggcagcac ccggacacgc accacccggg
541 cctcagccac tcctacatgg acgcggcgca gtacccgctg ccggaggagg tggatgtgct
601 ttttaacatc gacggtcaag gcaaccacgt cccgccctac tacggaaact cggtcagggc
661 cacggtgcag aggtaccctc cgacccacca cgggagccag gtgtgccgcc cgcctctgct
721 tcatggatcc ctaccctggc tggacggcgg caaagccctg ggcagccacc acaccgcctc
781 cccctggaat ctcagcccct tctccaagac gtccatccac cacggctccc cggggcccct
841 ctccgtctac cccccggcct cgtcctcctc cttgtcgggg ggccacgcca gcccgcacct
901 cttcaccttc ccgcccaccc cgccgaagga cgtctccccg gacccatcgc tgtccacccc
961 aggctcggcc ggctcggccc ggcaggacga gaaagagtgc ctcaagtacc aggtgcccct
1021 gcccgacagc atgaagctgg agtcgtccca ctcccgtggc agcatgaccg ccctgggtgg
1081 agcctcctcg tcgacccacc accccatcac cacctacccg ccctacgtgc ccgagtacag
1141 ctccggactc ttccccccca gcagcctgct gggcggctcc cccaccggct tcggatgcaa
1201 gtccaggccc aaggcccggt ccagcacagg cagggagtgt gtgaactgtg gggcaacctc
1261 gaccccactg tggcggcgag atggcacggg acactacctg tgcaacgcct gcgggctcta
1321 tcacaaaatg aacggacaga accggcccct cattaagccc aagcgaaggc tgtctgcagc
1381 caggagagca gggacgtcct gtgcgaactg tcagaccacc acaaccacac tctggaggag
1441 gaatgccaat ggggaccctg tctgcaatgc ctgtgggctc tactacaagc ttcacaatat
1501 taacagaccc ctgactatga agaaggaagg catccagacc agaaaccgaa aaatgtctag
1561 caaatccaaa aagtgcaaaa aagtgcatga ctcactggag gacttcccca agaacagctc
1621 gtttaacccg gccgccctct ccagacacat gtcctccctg agccacatct cgcccttcag
1681 ccactccagc cacatgctga ccacgcccac gccgatgcac ccgccatcca gcctgtcctt
1741 tggaccacac cacccctcca gcatggtcac cgccatgggt tagagccctg ctcgatgctc
1801 acagggcccc cagcgagagt ccctgcagtc cctttcgact tgcatttttg caggagcagt
1861 atcatgaagc ctaaacgcga tggatatatg tttttgaagg cagaaagcaa aattatgttt
1921 gccactttgc aaaggagctc actgtggtgt ctgtgttcca accactgaat ctggacccca
1981 tctgtgaata agccattctg actcatatcc cctatttaac agggtctcta gtgctgtgaa
2041 aaaaaaaaaa tgctgaacat tgcatataac ttatattgta agaaatactg tacaatgact
2101 ttattgcatc tgggtagctg taaggcatga aggatgccaa gaagtttaag gaatatggga
2161 gaaatagtgt ggaaattaag aagaaactag gtctgatatt caaatggaca aactgccagt
2221 tttgtttcct ttcactggcc acagttgttt gatgcattaa aagaaaataa aaaaaagaaa
2281 aaagagaaaa aaaaaaaaaa aaaaaa
//