LOCUS       BC003069                1434 bp    mRNA    linear   HUM 21-OCT-2003
DEFINITION  Homo sapiens major histocompatibility complex, class I, A, mRNA
            (cDNA clone MGC:2166 IMAGE:3510139), complete cds.
ACCESSION   BC003069
VERSION     BC003069.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1434)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1434)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Oct 8, 2003 this sequence version replaced BC003069.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 7 Row: d Column: 24
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 24797066.
FEATURES             Location/Qualifiers
     source          1..1434
                     /db_xref="H-InvDB:HIT000031402_03"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:2166 IMAGE:3510139"
                     /tissue_type="Brain, neuroblastoma"
                     /clone_lib="NIH_MGC_19"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..1434
                     /gene="HLA-A"
                     /db_xref="GeneID:3105"
                     /db_xref="MIM:142800"
     CDS             2..1099
                     /gene="HLA-A"
                     /codon_start=1
                     /product="HLA-A protein"
                     /protein_id="AAH03069.1"
                     /db_xref="GeneID:3105"
                     /db_xref="MIM:142800"
                     /translation="MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEP
                     RFIAVGYVDDTQFVRFDSDAASQKMEPRAPWIEQEGPEYWDQETRNMKAHSQTDRANL
                     GTLRGYYNQSEDGSHTIQIMYGCDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAA
                     DMAAQITKRKWEAVHAAEQRRVYLEGRCVDGLRRYLENGKETLQRTDPPKTHMTHHPI
                     SDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSG
                     EEQRYTCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRR
                     KSSDRKGGSYTQAASSDSAQGSDVSLTACKV"
     misc_feature    74..610
                     /gene="HLA-A"
                     /note="MHC_I; Region: Class I Histocompatibility antigen,
                     domains alpha 1 and 2"
                     /db_xref="CDD:pfam00129"
     misc_feature    665..880
                     /gene="HLA-A"
                     /note="IGc1; Region: Immunoglobulin C-Type"
                     /db_xref="CDD:smart00407"
BASE COUNT          301 a          420 c          444 g          269 t
ORIGIN      
        1 gatggccgtc atggcgcccc gaaccctcct cctgctactc tcgggggccc tggccctgac
       61 ccagacctgg gcgggctccc actccatgag gtatttcttc acatccgtgt cccggcccgg
      121 ccgcggggag ccccgcttca tcgccgtggg ctacgtggac gacacgcagt tcgtgcggtt
      181 cgacagcgac gccgcgagcc agaagatgga gccgcgggcg ccgtggatag agcaggaggg
      241 gccggagtat tgggaccagg agacacggaa tatgaaggcc cactcacaga ctgaccgagc
      301 gaacctgggg accctgcgcg gctactacaa ccagagcgag gacggttctc acaccatcca
      361 gataatgtat ggctgcgacg tggggccgga cgggcgcttc ctccgcgggt accggcagga
      421 cgcctacgac ggcaaggatt acatcgccct gaacgaggac ctgcgctctt ggaccgcggc
      481 ggacatggca gctcagatca ccaagcgcaa gtgggaggcg gtccatgcgg cggagcagcg
      541 gagagtctac ctggagggcc ggtgcgtgga cgggctccgc agatacctgg agaacgggaa
      601 ggagacgctg cagcgcacgg acccccccaa gacacatatg acccaccacc ccatctctga
      661 ccatgaggcc accctgaggt gctgggccct gggcttctac cctgcggaga tcacactgac
      721 ctggcagcgg gatggggagg accagaccca ggacacggag ctcgtggaga ccaggcctgc
      781 aggggatgga accttccaga agtgggcggc tgtggtggtg ccttctggag aggagcagag
      841 atacacctgc catgtgcagc atgagggtct gcccaagccc ctcaccctga gatgggagct
      901 gtcttcccag cccaccatcc ccatcgtggg catcattgct ggcctggttc tccttggagc
      961 tgtgatcact ggagctgtgg tcgctgccgt gatgtggagg aggaagagct cagatagaaa
     1021 aggagggagt tacactcagg ctgcaagcag tgacagtgcc cagggctctg atgtgtctct
     1081 cacagcttgt aaagtgtgag acagctgcct tgtgtgggac tgagaggcaa gagttgttcc
     1141 tgcccttccc tttgtgactt gaagaaccct gactttgttt ctgcaaaggc acctgcatgt
     1201 gtctgtgttc gtgtaggcat aatgtgagga ggtggggaga gcaccccacc cccatgtcca
     1261 ccatgaccct cttcccacgc tgacctgtgc tccctctcca atcatctttc ctgttccaga
     1321 gaggtggggc tgaggtgtct ccatctctgt ctcaacttca tggtgcactg agctgtaact
     1381 tcttccttcc ctattaaaat tagaacctga gtataaaaaa aaaaaaaaaa aaaa
//