LOCUS BC003069 1434 bp mRNA linear HUM 21-OCT-2003 DEFINITION Homo sapiens major histocompatibility complex, class I, A, mRNA (cDNA clone MGC:2166 IMAGE:3510139), complete cds. ACCESSION BC003069 VERSION BC003069.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1434) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1434) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (12-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Oct 8, 2003 this sequence version replaced BC003069.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 7 Row: d Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 24797066. FEATURES Location/Qualifiers source 1..1434 /db_xref="H-InvDB:HIT000031402_03" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:2166 IMAGE:3510139" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1434 /gene="HLA-A" /db_xref="GeneID:3105" /db_xref="MIM:142800" CDS 2..1099 /gene="HLA-A" /codon_start=1 /product="HLA-A protein" /protein_id="AAH03069.1" /db_xref="GeneID:3105" /db_xref="MIM:142800" /translation="MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEP RFIAVGYVDDTQFVRFDSDAASQKMEPRAPWIEQEGPEYWDQETRNMKAHSQTDRANL GTLRGYYNQSEDGSHTIQIMYGCDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAA DMAAQITKRKWEAVHAAEQRRVYLEGRCVDGLRRYLENGKETLQRTDPPKTHMTHHPI SDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSG EEQRYTCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRR KSSDRKGGSYTQAASSDSAQGSDVSLTACKV" misc_feature 74..610 /gene="HLA-A" /note="MHC_I; Region: Class I Histocompatibility antigen, domains alpha 1 and 2" /db_xref="CDD:pfam00129" misc_feature 665..880 /gene="HLA-A" /note="IGc1; Region: Immunoglobulin C-Type" /db_xref="CDD:smart00407" BASE COUNT 301 a 420 c 444 g 269 t ORIGIN 1 gatggccgtc atggcgcccc gaaccctcct cctgctactc tcgggggccc tggccctgac 61 ccagacctgg gcgggctccc actccatgag gtatttcttc acatccgtgt cccggcccgg 121 ccgcggggag ccccgcttca tcgccgtggg ctacgtggac gacacgcagt tcgtgcggtt 181 cgacagcgac gccgcgagcc agaagatgga gccgcgggcg ccgtggatag agcaggaggg 241 gccggagtat tgggaccagg agacacggaa tatgaaggcc cactcacaga ctgaccgagc 301 gaacctgggg accctgcgcg gctactacaa ccagagcgag gacggttctc acaccatcca 361 gataatgtat ggctgcgacg tggggccgga cgggcgcttc ctccgcgggt accggcagga 421 cgcctacgac ggcaaggatt acatcgccct gaacgaggac ctgcgctctt ggaccgcggc 481 ggacatggca gctcagatca ccaagcgcaa gtgggaggcg gtccatgcgg cggagcagcg 541 gagagtctac ctggagggcc ggtgcgtgga cgggctccgc agatacctgg agaacgggaa 601 ggagacgctg cagcgcacgg acccccccaa gacacatatg acccaccacc ccatctctga 661 ccatgaggcc accctgaggt gctgggccct gggcttctac cctgcggaga tcacactgac 721 ctggcagcgg gatggggagg accagaccca ggacacggag ctcgtggaga ccaggcctgc 781 aggggatgga accttccaga agtgggcggc tgtggtggtg ccttctggag aggagcagag 841 atacacctgc catgtgcagc atgagggtct gcccaagccc ctcaccctga gatgggagct 901 gtcttcccag cccaccatcc ccatcgtggg catcattgct ggcctggttc tccttggagc 961 tgtgatcact ggagctgtgg tcgctgccgt gatgtggagg aggaagagct cagatagaaa 1021 aggagggagt tacactcagg ctgcaagcag tgacagtgcc cagggctctg atgtgtctct 1081 cacagcttgt aaagtgtgag acagctgcct tgtgtgggac tgagaggcaa gagttgttcc 1141 tgcccttccc tttgtgactt gaagaaccct gactttgttt ctgcaaaggc acctgcatgt 1201 gtctgtgttc gtgtaggcat aatgtgagga ggtggggaga gcaccccacc cccatgtcca 1261 ccatgaccct cttcccacgc tgacctgtgc tccctctcca atcatctttc ctgttccaga 1321 gaggtggggc tgaggtgtct ccatctctgt ctcaacttca tggtgcactg agctgtaact 1381 tcttccttcc ctattaaaat tagaacctga gtataaaaaa aaaaaaaaaa aaaa //