LOCUS BC003060 1696 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens fucosidase, alpha-L- 2, plasma, mRNA (cDNA clone
MGC:1314 IMAGE:3505533), complete cds.
ACCESSION BC003060
VERSION BC003060.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1696)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1696)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC003060.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: d Column: 13.
FEATURES Location/Qualifiers
source 1..1696
/db_xref="H-InvDB:HIT000031395"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1314 IMAGE:3505533"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1696
/gene="FUCA2"
/gene_synonym="dJ20N2.5"
/gene_synonym="MGC1314"
/gene_synonym="RP1-20N2.5"
/db_xref="GeneID:2519"
/db_xref="HGNC:HGNC:4008"
/db_xref="MIM:136820"
CDS 31..1434
/gene="FUCA2"
/gene_synonym="dJ20N2.5"
/gene_synonym="MGC1314"
/gene_synonym="RP1-20N2.5"
/codon_start=1
/product="fucosidase, alpha-L- 2, plasma"
/protein_id="AAH03060.1"
/db_xref="GeneID:2519"
/db_xref="HGNC:HGNC:4008"
/db_xref="MIM:136820"
/translation="MRPQELPRLAFPLLLLLLLLLPPPPCPAHSATRFDPTWESLDAR
QLPAWFDQAKFGIFIHWGVFSVPSFGSEWFWWYWQKEKIPKYVEFMKDNYPPSFKYED
FGPLFTAKFFNANQWADIFQASGAKYIVLTSKHHEGFTLWGSEYSWNWNAIDEGPKRD
IVKELEVAIRNRTDLRFGLYYSLFEWFHPLFLEDESSSFHKRQFPVSKTLPELYELVN
NYQPEVLWSDGDGGAPDQYWNSTGFLAWLYNESPVRGTVVTNDRWGAGSICKHGGFYT
CSDRYNPGHLLPHKWENCMTIDKLSWGYRREAGISDYLTIEELVKQLVETVSCGGNLL
MNIGPTLDGTISVVFEERLRQVGSWLKVNGEAIYETYTWRSQNDTVTPDVWYTSKPKE
KLVYAIFLKWPTSGQLFLGHPKAILGATEVKLLGHGQPLNWISLEQNGIMVELPQLTI
HQMPCKWGWALALTNVI"
BASE COUNT 464 a 378 c 408 g 446 t
ORIGIN
1 gcagagagga cagccggcct gcgccgggac atgcggcccc aggagctccc caggctcgcg
61 ttcccgttgc tgctgttgct gttgctgctg ctgccgccgc cgccgtgccc tgcccacagc
121 gccacgcgct tcgaccccac ctgggagtcc ctggacgccc gccagctgcc cgcgtggttt
181 gaccaggcca agttcggcat cttcatccac tggggagtgt tttccgtgcc cagcttcggt
241 agcgagtggt tctggtggta ttggcaaaag gaaaagatac cgaagtatgt ggaatttatg
301 aaagataatt accctcctag tttcaaatat gaagattttg gaccactatt tacagcaaaa
361 ttttttaatg ccaaccagtg ggcagatatt tttcaggcct ctggtgccaa atacattgtc
421 ttaacttcca aacatcatga aggctttacc ttgtgggggt cagaatattc gtggaactgg
481 aatgccatag atgaggggcc caagagggac attgtcaagg aacttgaggt agccattagg
541 aacagaactg acctgcgttt tggactgtac tattcccttt ttgaatggtt tcatccgctc
601 ttccttgagg atgaatccag ttcattccat aagcggcaat ttccagtttc taagacattg
661 ccagagctct atgagttagt gaacaactat cagcctgagg ttctgtggtc ggatggtgac
721 ggaggagcac cggatcaata ctggaacagc acaggcttct tggcctggtt atataatgaa
781 agcccagttc ggggcacagt agtcaccaat gatcgttggg gagctggtag catctgtaag
841 catggtggct tctatacctg cagtgatcgt tataacccag gacatctttt gccacataaa
901 tgggaaaact gcatgacaat agacaaactg tcctggggct ataggaggga agctggaatc
961 tctgactatc ttacaattga agaattggtg aagcaacttg tagagacagt ttcatgtgga
1021 ggaaatcttt tgatgaatat tgggcccaca ctagatggca ccatttctgt agtttttgag
1081 gagcgactga ggcaagtggg gtcctggcta aaagtcaatg gagaagctat ttatgaaacc
1141 tatacctggc gatcccagaa tgacactgtc accccagatg tgtggtacac atccaagcct
1201 aaagaaaaat tagtctatgc catttttctt aaatggccca catcaggaca gctgttcctt
1261 ggccatccca aagctattct gggggcaaca gaggtgaaac tactgggcca tggacagcca
1321 cttaactgga tttctttgga gcaaaatggc attatggtag aactgccaca gctaaccatt
1381 catcagatgc cgtgtaaatg gggctgggct ctagccctaa ctaatgtgat ctaaagtgca
1441 gcagagtggc tgatgctgca agttatgtct aaggctagga actatcaggt gtctataatt
1501 gtagcacatg gagaaagcaa atgtaaaact ggataagaaa attattttgg cagttcagcc
1561 ctttcccttt ttcccactaa attttttctt aaattaccca tgtaaccatt ttaactctcc
1621 agtgcacttt gccattaaag tctcttcaca ttgatttgtt tccaaaaaaa aaaaaaaaaa
1681 aaaaaaaaaa aaaaaa
//