LOCUS BC003057 1192 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens tRNA methyltransferase 12 homolog (S. cerevisiae),
mRNA (cDNA clone IMAGE:3050210), partial cds.
ACCESSION BC003057
VERSION BC003057.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1192)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1192)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC003057.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: p Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8923675.
FEATURES Location/Qualifiers
source 1..1192
/db_xref="H-InvDB:HIT000086208"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3050210"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>1192
/gene="TRMT12"
/gene_synonym="TRM12"
/gene_synonym="TYW2"
/db_xref="GeneID:55039"
/db_xref="HGNC:HGNC:26091"
/db_xref="MIM:611244"
CDS 94..>1192
/gene="TRMT12"
/gene_synonym="TRM12"
/gene_synonym="TYW2"
/codon_start=1
/product="TRMT12 protein"
/protein_id="AAH03057.2"
/db_xref="GeneID:55039"
/db_xref="HGNC:HGNC:26091"
/db_xref="MIM:611244"
/translation="MERESGKPVAVVAVVTEPWFTQRYREYLQRQKLFDTQHRVEKMP
DGSVALPVLGETLPEQHLQELRNRVAPGSPCMLTQLPDPVPSKRAQGCSPAQKLCLEV
SRWVEGRGVKWSAELEADLPRSWQRHGNLLLLSEDCFQAKQWKNLGPELWETVALALG
VQRLAKRGRVSPDGTRTPAVTLLLGDHGWVEHVDNGIRYKFDVTQCMFSFGNITEKLR
VASLSCAGEVLVDLYAGIGYFTLPFLVHAGAAFVHACEWNPHAVVALRNNLEINGVAD
RCQIHFGDNRKLKLSNIADRVILGLIPSSEEGWPIACQVLRQDAGGILHIHQNVESFP
GKNLQALGVSKVEKEHWLYPQQITTNQKKKKK"
BASE COUNT 296 a 254 c 353 g 289 t
ORIGIN
1 atttaagacc gggaatttag tcagcctggt gagccgactc tgaggagatg gagtatcgct
61 gaggtgatga gagagaatgt ggttgttagc aacatggaga gagaaagtgg gaagcccgtg
121 gctgttgtcg cagttgtgac tgagccttgg tttacccagc gatacagaga atatctccag
181 aggcagaaac tctttgatac acagcaccgt gtggaaaaga tgccggatgg ctcggtggcg
241 ctaccggtgc tgggagagac gcttccagag cagcacctgc aggagctgag gaatcgtgtt
301 gccccaggca gtccctgtat gctcacgcag ctcccggatc ctgttccttc gaagagggcc
361 cagggttgtt cacctgccca aaaattgtgt cttgaggtga gtcgctgggt ggagggtcgg
421 ggagtcaagt ggtcagccga gttggaggct gatttgcccc gatcatggca acggcatggt
481 aatctcttgt tgctgagtga agactgtttc caagccaagc agtggaaaaa tctgggaccg
541 gaactctggg agaccgttgc cttggcactt ggcgtccagc gtttggcaaa acgagggcgg
601 gtatcaccgg atggtactcg aactccagca gtgacactgc tgctgggtga ccatggctgg
661 gtagagcatg tggataatgg tatccgttat aagtttgacg tgacccagtg tatgttctcc
721 tttggaaaca tcactgagaa gcttcgagtg gcatcgttgt cctgtgctgg agaagtgctg
781 gtggatctct atgcagggat tggttatttt acattgcctt tcctagttca tgctggtgct
841 gccttcgtcc atgcttgtga gtggaatccc catgctgtag ttgctctgag aaataacctt
901 gagatcaatg gagtagcaga tcggtgccaa atacactttg gagataacag aaaactgaag
961 ctctcaaata ttgcagatag ggtgatcctg gggctgattc ccagctctga agaaggctgg
1021 cccattgcct gccaagtgtt aaggcaggat gctggaggca ttttgcatat ccaccaaaat
1081 gtggaatctt tcccagggaa gaatcttcag gctcttggag tcagcaaagt agagaaagag
1141 cattggctgt atcctcagca aattaccacc aaccaaaaaa aaaaaaaaaa aa
//