LOCUS BC003054 2528 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens bifunctional apoptosis regulator, mRNA (cDNA clone
MGC:837 IMAGE:3537783), complete cds.
ACCESSION BC003054
VERSION BC003054.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2528)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2528)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: f Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7706090.
FEATURES Location/Qualifiers
source 1..2528
/db_xref="H-InvDB:HIT000031392"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:837 IMAGE:3537783"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2528
/gene="BFAR"
/gene_synonym="BAR"
/gene_synonym="RNF47"
/db_xref="GeneID:51283"
/db_xref="HGNC:HGNC:17613"
CDS 113..1465
/gene="BFAR"
/gene_synonym="BAR"
/gene_synonym="RNF47"
/codon_start=1
/product="bifunctional apoptosis regulator"
/protein_id="AAH03054.1"
/db_xref="GeneID:51283"
/db_xref="HGNC:HGNC:17613"
/translation="MEEPQKSYVNTMDLERDEPLKSTGPQISVSEFSCHCCYDILVNP
TTLNCGHSFCRHCLALWWASSKKTECPECREKWEGFPKVSILLRDAIEKLFPDAIRLR
FEDIQQNNDIVQSLAAFQKYGNDQIPLAPNTGRANQQMGGGFFSGVLTALTGVAVVLL
VYHWSSRESEHDLLVHKAVAKWTAEEVVLWLEQLGPWASLYRERFLSERVNGRLLLTL
TEEEFSKTPYTIENSSHRRAILMELERVKALGVKPPQNLWEYKAVNPGRSLFLLYALK
SSPRLSLLYLYLFDYTDTFLPFIHTICPLQEDSSGEDIVTKLLDLKEPTWKQWREFLV
KYSFLPYQLIAEFAWDWLEVHYWTSRFLIINAMLLSVLELFSFWRIWSRSELKTVPQR
MWSHFWKVSTQGLFVAMFWPLIPQFVCNCLFYWALYFNPIINIDLVVKELRRLETQVL
"
BASE COUNT 677 a 592 c 621 g 638 t
ORIGIN
1 tgagaataat ggcccggttg gcccgggacg agtggaatga ttaatgatgt tttgcagcag
61 ttttctacgt ctgaaatttt ttatgtctct ggaacccaga atttgctaag agatggagga
121 acctcagaaa agctatgtga acacaatgga ccttgagaga gatgaacctc tcaaaagcac
181 cggccctcag atttctgtta gtgaattttc ttgccactgc tgctacgaca tcctggttaa
241 ccccaccacc ttgaactgtg ggcacagctt ctgccgtcac tgccttgctt tatggtgggc
301 atcttcaaag aaaacagaat gtccagaatg cagagaaaaa tgggaaggtt tccccaaagt
361 cagtattctc ctcagggatg ccattgaaaa gttatttcct gatgccatta gactgagatt
421 tgaagacatt cagcagaata atgacatagt ccaaagtctt gcagcctttc agaaatatgg
481 gaatgatcag attcctttag ctcctaacac aggccgagcg aatcagcaga tgggaggggg
541 attcttttcc ggtgtgctca cagctttaac tggagtggca gtggtcctgc tcgtctatca
601 ctggagcagc agggaatctg aacacgacct cctggtccac aaggctgtgg ccaaatggac
661 ggcggaagaa gttgtcctct ggctggagca gctgggccct tgggcatctc tttacaggga
721 aaggttttta tctgaacgag taaatggaag gttgctttta actttgacag aggaagaatt
781 ttccaagacg ccctatacca tagaaaacag cagccacagg agagccatcc tcatggagct
841 agaacgtgtc aaagcattag gcgtgaagcc cccccagaat ctctgggaat ataaggctgt
901 gaacccaggc aggtccctgt tcctgctata cgccctcaag agctccccca ggctgagtct
961 gctctacctg tacctgtttg actacaccga caccttccta cctttcatcc acaccatctg
1021 ccctctgcaa gaagacagct ctggggagga catcgtcacc aagcttctgg atcttaagga
1081 gcctacgtgg aagcagtgga gagagttcct ggtcaaatac tccttccttc cataccagct
1141 gattgctgag tttgcttggg actggttgga ggtccattac tggacatcac ggtttctcat
1201 catcaatgct atgttactct cagttctgga attattctcc ttttggagaa tctggtcgag
1261 aagtgaactg aagaccgtgc ctcagaggat gtggagccat ttctggaaag tatcaacgca
1321 ggggcttttt gtggccatgt tctggcccct catccctcag tttgtttgca actgtttgtt
1381 ttactgggcc ctgtacttta acccaattat taacattgat cttgtggtca aggaactccg
1441 gcggctggaa acccaggtgt tgtgactggc actgcccagg ctgagactct tcaagtcccg
1501 ctgacgtctg agctttgatg cttaagaggg gtgaggcagg gagcggactt cctattttct
1561 accctcagta aaacaaggtg ctgctttgta tatcaaaagc tccaaccatg tcctctcccc
1621 ctcagcctgt gggtggcacg agcaaggact gacatccgca cagggaggat tgtctgtttg
1681 gctgacacag cagcagccct tcccacccag ccaccttcct cacagggact aggaggctca
1741 gtccccaacg gctggcaaga ctcagggtcc tcagcggaca tggtgtgggt gacatcagaa
1801 gggtgccaca tcagtcccct ccccaacctc agtgactgac agaggatccg gatctcagag
1861 cctgagacca ggtttattgg ggcctggcct gtcctctaag tcaagtttag gaaaacaagg
1921 ataagattct gtcataggca tagagagttg cacataaaaa ataccgaaga aaacccaaaa
1981 ttcaatcaac aattctgtct tattgaagag ttgctaggat tcagagtaaa actcaaagga
2041 ttcagtttga gcctagaatg atggttagac ttgtagtcac tgggcttttg ttttgcttta
2101 tggaaatcat tgaaggtctg gatccctttc tctgaatgga gagattgaga gggatgtcgg
2161 gcagttccca ttagatttag tggccttcat gttattcaga attgttttgg tgatacctca
2221 cccctgtaat cccagcactt tgggtgggtg aggcaggcgg atcacttgaa gccaggactt
2281 caagaccagc ttggccaaca tggtgaaacc tcatctctac taaaaataca aaaattagcc
2341 aagtgtgatg gcacatacct gtaatcccag ctacttggaa ttggaaatcg cctgaaccca
2401 ggaggcggag gttgcaggga gggagactgc accactgcac ttcagcctgg gtgacagagg
2461 gagactctgt cttaaaaaaa aaaaaaaaat catctgtaaa ataaaaaaaa aaaaaaaaaa
2521 aaaaaaaa
//