LOCUS BC003049 1378 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SERPINE1 mRNA binding protein 1, mRNA (cDNA clone
MGC:684 IMAGE:3547236), complete cds.
ACCESSION BC003049
VERSION BC003049.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1378)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1378)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: b Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 66346684.
FEATURES Location/Qualifiers
source 1..1378
/db_xref="H-InvDB:HIT000031389"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:684 IMAGE:3547236"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1378
/gene="SERBP1"
/gene_synonym="CGI-55"
/gene_synonym="CHD3IP"
/gene_synonym="DKFZp564M2423"
/gene_synonym="HABP4L"
/gene_synonym="PAI-RBP1"
/gene_synonym="PAIRBP1"
/db_xref="GeneID:26135"
/db_xref="HGNC:HGNC:17860"
/db_xref="MIM:607378"
CDS 49..1275
/gene="SERBP1"
/gene_synonym="CGI-55"
/gene_synonym="CHD3IP"
/gene_synonym="DKFZp564M2423"
/gene_synonym="HABP4L"
/gene_synonym="PAI-RBP1"
/gene_synonym="PAIRBP1"
/codon_start=1
/product="SERPINE1 mRNA binding protein 1"
/protein_id="AAH03049.1"
/db_xref="GeneID:26135"
/db_xref="HGNC:HGNC:17860"
/db_xref="MIM:607378"
/translation="MPGHLQEGFGCVVTNRFDQLFDDESDPFEVLKAAENKKKEAGGG
GVGGPGAKSAAQAAAQTNSNAAGKQLRKESQKDRKNPLPPSVGVVDKKEETQPPVALK
KEGIRRVGRRPDQQLQGEGKIIDRRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIDR
PIRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSGSDRSSFSHYSGLKHEDKRGG
SGSHNWGTVKDELTESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHPVADTENKENE
VEEVKEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGADGQWKKGFVLHKSKSEEAH
AEDSVMDHHFRKPANDITSQLEINFGDLGRPGRGGRGGRGGRGRGGRPNRGSRTDKSS
ASAPDVDDPEAFPALA"
BASE COUNT 425 a 291 c 406 g 256 t
ORIGIN
1 gcgcggcccg ctgcaatccg tggaggaacg cgccgccgag ccaccatcat gcctgggcac
61 ttacaggaag gcttcggctg cgtggtcacc aaccgattcg accagttatt tgacgacgaa
121 tcggacccct tcgaggtgct gaaggcagca gagaacaaga aaaaagaagc cggcgggggc
181 ggcgttgggg gccctggggc caagagcgca gctcaggccg cggcccagac caactccaac
241 gcggcaggca aacagctgcg caaggagtcc cagaaagacc gcaagaaccc gctgcccccc
301 agcgttggcg tggttgacaa gaaagaggag acgcagccgc ccgtggcgct taagaaagaa
361 ggaataagac gagttggaag aagacctgat caacaacttc agggtgaagg gaaaataatt
421 gatagaagac cagaaaggcg accacctcgt gaacgaagat tcgaaaagcc acttgaagaa
481 aagggtgaag gaggcgaatt ttcagttgat agaccgatta ttgaccgacc tattcgaggt
541 cgtggtggtc ttggaagagg tcgagggggc cgtggacgtg gaatgggccg aggagatgga
601 tttgattctc gtggcaaacg tgaatttgat aggcatagtg gaagtgatag atcttctttt
661 tcacattaca gtggcctgaa gcacgaggac aaacgtggag gtagcggatc tcacaactgg
721 ggaactgtca aagacgaatt aacagagtcc cccaaataca ttcagaaaca aatatcttat
781 aattacagtg acttggatca atcaaatgtg actgaggaaa cacctgaagg tgaagaacat
841 catccagtgg cagacactga aaataaggag aatgaagttg aagaggtaaa agaggagggt
901 ccaaaagaga tgactttgga tgagtggaag gctattcaaa ataaggaccg ggcaaaagta
961 gaatttaata tccgaaaacc aaatgaaggt gctgatgggc agtggaagaa gggatttgtt
1021 cttcataaat caaagagtga agaggctcat gctgaagatt cggttatgga ccatcatttc
1081 cggaagccag caaatgatat aacgtctcag ctggagatca attttggaga ccttggccgc
1141 ccaggacgtg gcggcagggg aggacgaggt ggacgtgggc gtggtgggcg cccaaaccgt
1201 ggcagcagga ccgacaagtc aagtgcttct gctcctgatg tggatgaccc agaggcattc
1261 ccagctctgg cttaactgga tgccataaga caaccctggt tcctttgtga acccttctgt
1321 tcaaagcttt tgcatgctta aggattccaa acgactaaga aaaaaaaaaa aaaaaaaa
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