LOCUS BC003042 1497 bp mRNA linear HUM 26-JUN-2008
DEFINITION Homo sapiens akirin 2, mRNA (cDNA clone MGC:4366 IMAGE:2822886),
complete cds.
ACCESSION BC003042
VERSION BC003042.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1497)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1497)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: p Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39725640.
FEATURES Location/Qualifiers
source 1..1497
/db_xref="H-InvDB:HIT000031383"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4366 IMAGE:2822886"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1497
/gene="AKIRIN2"
/gene_synonym="dJ486L4.2"
/db_xref="GeneID:55122"
/db_xref="HGNC:HGNC:21407"
CDS 525..1136
/gene="AKIRIN2"
/gene_synonym="dJ486L4.2"
/codon_start=1
/product="akirin 2"
/protein_id="AAH03042.1"
/db_xref="GeneID:55122"
/db_xref="HGNC:HGNC:21407"
/translation="MACGATLKRTLDFDPLLSPASPKRRRCAPLSAPTSAAASPLSAA
AATAASFSAAAASPQKYLRMEPSPFGDVSSRLTTEQILYNIKQEYKRMQKRRHLETSF
QQTDPCCTSDAQPHAFLLSGPASPGTSSAASSPLKKEQPLFTLRQVGMICERLLKERE
EKVREEYEEILNTKLAEQYDAFVKFTHDQIMRRYGEQPASYVS"
BASE COUNT 337 a 455 c 365 g 340 t
ORIGIN
1 gttggacgtg ttcgcttggg ttcctgctgc ggcagccacc tcgcaatctc tctgcatcga
61 tcgccgctcg caagctactg accgtactcg ggcgtattag gagccgcgtt ccagcctcac
121 accccacggt gctgttttcg acttcagaaa ggatctagcc tcagcacaga agcgcctcag
181 gcgcggcgca aagctcgagc ggacggcggg ggcggccgga gcctctctcg ggggagccgc
241 gcctgaggag gcggaagaac ccccctgacg cgactggcgt gtgcttctgc ccgccaccgc
301 ccctcccgct ctcacccggg ccgtccctgg ccactgcccc tgccgcggag gcagcggcgg
361 cagcggctct cctttccaca gccggcgctc cgcgacccgc ttggctcctg agcccgtcgg
421 gtaggctctc ctcgagttcc cgctcttcac cccttccctc accctcttct ttcgtcaccc
481 gtccccgacc ccacccgagc ccggcgcctc agctgccccc ggccatggcg tgcggagcca
541 ctctgaaaag gactctggat ttcgacccgc tgttgagccc ggcgtccccg aagcgcaggc
601 gatgtgcgcc attgtcggcg cccacctcgg ccgctgcctc cccgttgtcg gcggccgcgg
661 ccaccgccgc ctccttctcc gctgcggccg cctcgccgca gaagtatctc cgaatggagc
721 catccccctt cggcgacgtc tcctcccgcc tcaccacaga acaaattctg tacaacataa
781 aacaagagta taaacgaatg cagaagagaa gacatttaga aacgagtttc caacagacag
841 atccgtgttg tacttctgat gcacagccac atgcatttct cctcagtgga ccagcttcac
901 cagggacttc atctgcagca tcctcaccat taaaaaaaga acagccctta tttactctac
961 ggcaggttgg gatgatctgt gaacgtttgt tgaaagaacg tgaagagaaa gttcgagaag
1021 aatatgaaga aatattgaac acaaaacttg cagaacaata tgatgcgttt gtgaagttta
1081 cgcatgatca aataatgcga cgatatggag aacagcctgc tagctatgtt tcatgaatca
1141 cgtatcctgc atttgtgggc tgccttgttc cttgttgagt tgttgcaaga ggtcccaatt
1201 atgacatgca gcaatgccaa taccccttct gtgaatacag gttatttcaa gctttcgtca
1261 gtggcaacca ctcttaggca gcagcaactg gttttggaaa tttccctgat gtcagtacca
1321 cctggatgtg gacctttgct acctgtatta ataccagtgg cctcattttg ctgtatcatt
1381 acaatttggc ttcttatatt aatgtttgaa aaggattaaa gctggtattc tagaacatgc
1441 ccttcactgg ttgtgtaaat aaaactgtag aatgacaaaa aaaaaaaaaa aaaaaaa
//