LOCUS BC003035 2441 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 8 open reading frame 30A, mRNA (cDNA clone
MGC:4355 IMAGE:2822563), complete cds.
ACCESSION BC003035
VERSION BC003035.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2441)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2441)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: f Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13124772.
FEATURES Location/Qualifiers
source 1..2441
/db_xref="H-InvDB:HIT000031376_04"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4355 IMAGE:2822563"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2441
/gene="C8orf30A"
/gene_synonym="FLJ40907"
/db_xref="GeneID:51236"
/db_xref="HGNC:HGNC:24161"
CDS 68..1240
/gene="C8orf30A"
/gene_synonym="FLJ40907"
/codon_start=1
/product="chromosome 8 open reading frame 30A"
/protein_id="AAH03035.1"
/db_xref="GeneID:51236"
/db_xref="HGNC:HGNC:24161"
/translation="MGEAGAGAGASGGPEASPEAEVVKLLPFLAPGARADLQAAAVRH
VLALTGCGPGRALLAGQAALLQALMELAPASAPARDAARALVNLAADPGLHETLLAAD
PGLPARLMGRALDPQWPWAEEAAAALANLSREPAPCAALMAALAAAEPADSGLERLVR
ALCTPGYNARAPLHYLAPLLSNLSQRPAARAFLLDPDRCVVQRLLPLTQYPDSSVRRG
GVVGTLRNCCFEHRHHEWLLGPEVDILPFLLLPLAGPEDFSEEEMERLPVDLQYLPPD
KQREPDADIRKMLVEAIMLLTATAPGRQQVRDQGAYLILRELHSWEPEPDVRTACEKL
IQVLIGDEPERGMENLLEVQVPEDVEQQLQQLDCREQEQLERELAPEPWVERATPT"
BASE COUNT 419 a 808 c 764 g 450 t
ORIGIN
1 gggccacaca gcggacccct aagcggaccg ctggcaccgg tcgggtggca gcagagtgtc
61 gctcgacatg ggggaggccg gggctggcgc tggcgcctcg ggagggccgg aggcaagccc
121 ggaggcagag gtggtgaagc tgctgccctt cctggcgccg ggcgcgcggg cggacctgca
181 ggcggcggcg gtgcggcacg tgctggcgct gactggctgc ggacccggcc gcgcgctgtt
241 ggcggggcag gcggcgctgc tgcaggcgct gatggagctg gcgccggcct ctgccccggc
301 ccgggacgcc gcccgcgcgc tcgtgaactt ggccgccgac cccggcctgc acgagacatt
361 gctggcggcc gaccccgggc tgccagcgcg cctgatgggc cgcgcgttgg acccgcagtg
421 gccctgggcc gaggaggcgg ccgccgcgct agccaacctc agtcgcgagc cggcgccgtg
481 tgcagcgctc atggcggcgc tggcggccgc ggagccggca gactcgggcc tggagcggct
541 ggtgcgcgcg ctgtgcacgc ccggctacaa cgcccgcgcg cccctgcact acctagcgcc
601 gctgctctcc aacctcagcc aacgccctgc ggcgcgggcc ttcctactgg accccgacag
661 gtgcgtggtc cagcggctgc tgccccttac ccagtacccc gactcctctg tacgcagggg
721 cggggtggtg gggacgctgc ggaattgctg cttcgagcac cgacatcacg agtggttgct
781 tggacctgag gtggacattc tccccttttt gctcctgccc ttggctgggc ctgaggattt
841 ctccgaggaa gagatggaac ggctgcctgt cgacttgcag tacctgccac cagacaagca
901 gcgagaacct gatgcagaca tccgcaagat gcttgttgaa gccatcatgc tgctgacagc
961 cacagcacca ggtcggcagc aggtgcggga ccagggagcc tacctgatcc ttcgagagct
1021 gcacagctgg gagccggagc ccgacgtgcg gacggcttgt gagaagctca tccaggtgct
1081 tattggggac gagcctgaac gtggcatgga aaacctgctg gaggtgcagg tgcctgagga
1141 tgtggagcag cagctgcagc agctggattg cagggagcag gagcagttgg agcgggagct
1201 ggccccagag ccatgggtgg agagggccac acccacctga ggcccctgca gccggacacc
1261 agctccaggg tcccctttgc caggctttct cagaccaggc cttcctgcag ctgtctgcag
1321 gccccctggg tccccttgtt cagagactgt gctcttctga gaagcagagc tacgcttagg
1381 ctccagtaag gattggaggc actttccagc cctgtgcagt gttgctacca gcaagaatga
1441 aggttgtgca gagcagtact gtgaggtagg caccgtgact cggctgcctg tgcagaaggt
1501 ggaggtggca ggcggatggc cagggagcca tgagaagact cttcctgggc acggcgtggg
1561 gactggacag aaaaccactg caagccccaa ggagccagct gaagcctccc aatccccagg
1621 gcactgcaga gtctgggcag aggtgggcgc ataggtacaa gtgctgcttt gtcagcctca
1681 ctccctgcag ctctcagctc cctgttccct gagacctggc ctcaaagggc tgacccagcc
1741 atacgtagat cctggggtct ttctaggact gtgcctccct gcttgaccta tgctccagga
1801 ccctgccctc aacccttgtc agctccctaa gtcttcctgt ttcccagtct cagattgagt
1861 gggtgctctc attggcctct ctagctaggc cgtctccctg gtcagcttcc ttgagcctgg
1921 gccactcctc cctggccttc ttacctctgc caagagcctc cagatgtgcc tgcagcctag
1981 tccctgccca agcttctccc ccagccaccc tctgcccctg tggtagagcc cactataggc
2041 ccaggcgcct tacgtgcttc tcccctggac ctatgtgcat ccctcacctg ccagttatgt
2101 ggctgccaag ccccacaggc tgtcatggtg gctcttgcca cacttccctt cctgagctga
2161 cctgacctca ctgccacctc ttgcattggg atcctgaggg ctggcccctg ctcactgatg
2221 ggccctccca ggcccgtcaa gccctggtga aggagcttag cttgtcttct tggcaattca
2281 caatgcctca ctccacaccc taaaactgga gcgtccccta tggtctcctg ctgtggcttg
2341 ggtgccgggc gtctcccgcc tccaggatct cctctcacct gcccccatta aagctctgcc
2401 actcaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa c
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