LOCUS BC003026 757 bp mRNA linear HUM 21-SEP-2006
DEFINITION Homo sapiens peptidylprolyl isomerase A (cyclophilin A), mRNA (cDNA
clone MGC:4203 IMAGE:2823490), complete cds.
ACCESSION BC003026
VERSION BC003026.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 757)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 757)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: e Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56847631.
FEATURES Location/Qualifiers
source 1..757
/db_xref="H-InvDB:HIT000050420"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4203 IMAGE:2823490"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..757
/gene="PPIA"
/gene_synonym="CYPA"
/gene_synonym="CYPH"
/gene_synonym="MGC12404"
/db_xref="GeneID:5478"
/db_xref="HGNC:HGNC:9253"
/db_xref="MIM:123840"
CDS 29..526
/gene="PPIA"
/gene_synonym="CYPA"
/gene_synonym="CYPH"
/gene_synonym="MGC12404"
/codon_start=1
/product="peptidylprolyl isomerase A (cyclophilin A)"
/protein_id="AAH03026.2"
/db_xref="GeneID:5478"
/db_xref="HGNC:HGNC:9253"
/db_xref="MIM:123840"
/translation="MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEK
GFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMAN
AGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIAD
CGQLE"
BASE COUNT 209 a 169 c 179 g 200 t
ORIGIN
1 cgccgaggaa aaccgtgtac tattagccat ggtcaacccc accgtgttct tcgacattgc
61 cgtcgacggc gagcccttgg gccgcgtctc ctttgagctg tttgcagaca aggtcccaaa
121 gacagcagaa aattttcgtg ctctgagcac tggagagaaa ggatttggtt ataagggttc
181 ctgctttcac agaattattc cagggtttat gtgtcagggt ggtgacttca cacgccataa
241 tggcactggt ggcaagtcca tctatgggga gaaatttgaa gatgagaact tcatcctaaa
301 gcatacgggt cctggcatct tgtccatggc aaatgctgga cccaacacaa atggttccca
361 gtttttcatc tgcactgcca agactgagtg gttggatggc aagcatgtgg tgtttggcaa
421 agtgaaagaa ggcatgaata ttgtggaggc catggagcgc tttgggtcca ggaatggcaa
481 gaccagcaag aagatcacca ttgctgactg tggacaactc gaataagttt gacttgtgtt
541 ttatcttaac caccagatca ttccttctgt agctcaggag agcacccctc caccccattt
601 gctcgcagta tcctagaatc tttgtgctct cgctgcagtt ccctttgggt tccatgtttt
661 ccttgttccc tcccatgcct agctggattg cagagttaag tttatgatta tgaaataaaa
721 actaaataac aaaaaaaaaa aaaaaaaaaa aaaaaaa
//