LOCUS BC003025 1257 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens stomatin (EPB72)-like 2, mRNA (cDNA clone MGC:4191
IMAGE:2821269), complete cds.
ACCESSION BC003025
VERSION BC003025.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1257)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1257)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: l Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7305502.
FEATURES Location/Qualifiers
source 1..1257
/db_xref="H-InvDB:HIT000031369"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4191 IMAGE:2821269"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1257
/gene="STOML2"
/gene_synonym="HSPC108"
/gene_synonym="SLP-2"
/db_xref="GeneID:30968"
/db_xref="HGNC:HGNC:14559"
/db_xref="MIM:608292"
CDS 23..1093
/gene="STOML2"
/gene_synonym="HSPC108"
/gene_synonym="SLP-2"
/codon_start=1
/product="stomatin (EPB72)-like 2"
/protein_id="AAH03025.1"
/db_xref="GeneID:30968"
/db_xref="HGNC:HGNC:14559"
/db_xref="MIM:608292"
/translation="MLARAARGTGALLLRGSLLASGRAPRRASSGLPRNTVVLFVPQQ
EAWVVERMGRFHRILEPGLNILIPVLDRIRYVQSLKEIVINVPEQSAVTLDNVTLQID
GVLYLRIMDPYKASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNASIVDA
INQAADCWGIRCLRYEIKDIHVPPRVKESMQMQVEAERRKRATVLESEGTRESAINVA
EGKKQAQILASEAEKAEQINQAAGEASAVLAKAKAKAEAIRILAAALTQHNGDAAASL
TVAEQYVSAFSKLAKDSNTILLPSNPGDVTSMVAQAMGVYGALTKAPVPGTPDSLSSG
SSRDVQGTDASLDEELDRVKMS"
BASE COUNT 309 a 324 c 364 g 260 t
ORIGIN
1 gaggtcgctg cggcggtggg aaatgctggc gcgcgcggcg cggggcactg gggccctttt
61 gctgaggggc tctctactgg cttctggccg cgctccgcgc cgcgcctcct ctggattgcc
121 ccgaaacacc gtggtactgt tcgtgccgca gcaggaggcc tgggtggtgg agcgaatggg
181 ccgattccac cggatcctgg agcctggttt gaacatcctc atccctgtgt tagaccggat
241 ccgatatgtg cagagtctca aggaaattgt catcaacgtg cctgagcagt cggctgtgac
301 tctcgacaat gtaactctgc aaatcgatgg agtcctttac ctgcgcatca tggaccctta
361 caaggcaagc tacggtgtgg aggaccctga gtatgccgtc acccagctag ctcaaacaac
421 catgagatca gagctcggca aactctctct ggacaaagtc ttccgggaac gggagtccct
481 gaatgccagc attgtggatg ccatcaacca agctgctgac tgctggggta tccgctgcct
541 ccgttatgag atcaaggata tccatgtgcc accccgggtg aaagagtcta tgcagatgca
601 ggtggaggca gagcggcgga aacgggccac agttctagag tctgagggga cccgagagtc
661 ggccatcaat gtggcagaag ggaagaaaca ggcccagatc ctggcctccg aagcagaaaa
721 ggctgaacag ataaatcagg cagcaggaga ggccagtgca gttctggcga aggccaaggc
781 taaagctgaa gctattcgaa tcctggctgc agctctgaca caacataatg gagatgcagc
841 agcttcactg actgtggccg agcagtatgt cagcgcgttc tccaaactgg ccaaggactc
901 caacactatc ctactgccct ccaaccctgg cgatgtcacc agcatggtgg ctcaggccat
961 gggtgtatat ggagccctca ccaaagcccc agtgccaggg actccagact cactctccag
1021 tgggagcagc agagatgtcc agggtacaga tgcaagtctt gatgaggaac ttgatcgagt
1081 caagatgagt tagtggagct gggcttggcc agggagtctg gggacaagga agcagatttt
1141 cctgattctg gctctagctt ccctgccaag attttggttt ttattttttt atttgaactt
1201 tagtcgtgta ataaactcac cagtggcaaa ccagaaaaaa aaaaaaaaaa aaaaaaa
//