LOCUS BC003017 1457 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3, mRNA (cDNA clone MGC:4047 IMAGE:2822303), complete cds. ACCESSION BC003017 VERSION BC003017.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1457) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1457) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 9 Row: j Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 8393566. FEATURES Location/Qualifiers source 1..1457 /db_xref="H-InvDB:HIT000031363" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:4047 IMAGE:2822303" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1457 /gene="SPOCK3" /gene_synonym="HSAJ1454" /gene_synonym="TES-3" /db_xref="GeneID:50859" /db_xref="HGNC:HGNC:13565" /db_xref="MIM:607989" CDS 93..1394 /gene="SPOCK3" /gene_synonym="HSAJ1454" /gene_synonym="TES-3" /codon_start=1 /product="sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3" /protein_id="AAH03017.1" /db_xref="GeneID:50859" /db_xref="HGNC:HGNC:13565" /db_xref="MIM:607989" /translation="MLKVSAVLCVCAAAWCSQSLAAAAAVAAAGGRSDGGNFLDDKQW LTTISQYDKEVGQWNKFRDDDYFRTWSPGKPFDQALDPAKDPCLKMKCSRHKVCIAQD SQTAVCISHRRLTHRMKEAGVDHRQWRGPILSTCKQCPVVYPSPVCGSDGHTYSFQCK LEYQACVLGKQISVKCEGHCPCPSDKPTSTSRNVKRACSDLEFREVANRLRDWFKALH ESGSQNKKTKTLLRPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIYLD KNEQCTKAFFNSCDTYKDSLISNNEWCYCFQRQQDPPCQTELSNIQKRQGVKKLLGQY IPLCDEDGYYKPTQCHGSVGQCWCVDRYGNEVMGSRINGVADCAIDFEISGDFASGDF HEWTDDEDDEDDIMNDEDEIEDDDEDEGDDDDGGDDHDVYI" BASE COUNT 444 a 285 c 379 g 349 t ORIGIN 1 ggcgcgtgca gcagctccag aaagcagcga gttggcagag cagggctgca tttccagcag 61 gagctgcgag cacagtgctg gctcacaaca agatgctcaa ggtgtcagcc gtactgtgtg 121 tgtgtgcagc cgcttggtgc agtcagtctc tcgcagctgc cgcggcggtg gctgcagccg 181 gggggcggtc ggacggcggt aattttctgg atgataaaca atggctcacc acaatctctc 241 agtatgacaa ggaagtcgga cagtggaaca aattccgaga cgatgattat ttccgcactt 301 ggagtccagg aaaacccttc gatcaggctt tagatccagc taaggatcca tgcttaaaga 361 tgaaatgtag tcgccataaa gtatgcattg ctcaagattc tcagactgca gtctgcatta 421 gtcaccggag gcttacacac aggatgaaag aagcaggagt agaccatagg cagtggaggg 481 gtcccatatt atccacctgc aagcagtgcc cagtggtcta tcccagccct gtttgtggtt 541 cagatggtca tacctactct tttcagtgca aactagaata tcaggcatgt gtcttaggaa 601 aacagatctc agtcaaatgt gaaggacatt gcccatgtcc ttcagataag cccaccagta 661 caagcagaaa tgttaagaga gcatgcagtg acctggagtt cagggaagtg gcaaacagat 721 tgcgggactg gttcaaggcc cttcatgaaa gtggaagtca aaacaagaag acaaaaacat 781 tgctgaggcc tgagagaagc agattcgata ccagcatctt gccaatttgc aaggactcac 841 ttggctggat gtttaacaga cttgatacaa actatgacct gctattggac cagtcagagc 901 tcagaagcat ttaccttgat aagaatgaac agtgtaccaa ggcattcttc aattcttgtg 961 acacatacaa ggacagttta atatctaata atgagtggtg ctactgcttc cagagacagc 1021 aagacccacc ttgccagact gagctcagca atattcagaa gcggcaaggg gtaaagaagc 1081 tcctaggaca gtatatcccc ctgtgtgatg aagatggtta ctacaagcca acacaatgtc 1141 atggcagtgt tggacagtgc tggtgtgttg acagatatgg aaatgaagtc atgggatcca 1201 gaataaatgg tgttgcagat tgtgctatag attttgagat ctccggagat tttgctagtg 1261 gcgattttca tgaatggact gatgatgagg atgatgaaga cgatattatg aatgatgaag 1321 atgaaattga agatgatgat gaagatgaag gggatgatga tgatggtggt gatgaccatg 1381 atgtatacat ttgattgatg acagttgaaa tcaataaatt ctacatttct aatatttaca 1441 aaaaaaaaaa aaaaaaa //