LOCUS BC003016 1021 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens platelet-activating factor acetylhydrolase, isoform
Ib, gamma subunit 29kDa, mRNA (cDNA clone MGC:4046 IMAGE:2822228),
complete cds.
ACCESSION BC003016
VERSION BC003016.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1021)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1021)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: l Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20149519.
FEATURES Location/Qualifiers
source 1..1021
/db_xref="H-InvDB:HIT000031362"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4046 IMAGE:2822228"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1021
/gene="PAFAH1B3"
/db_xref="GeneID:5050"
/db_xref="HGNC:HGNC:8576"
/db_xref="MIM:603074"
CDS 263..958
/gene="PAFAH1B3"
/codon_start=1
/product="platelet-activating factor acetylhydrolase,
isoform Ib, gamma subunit 29kDa"
/protein_id="AAH03016.1"
/db_xref="GeneID:5050"
/db_xref="HGNC:HGNC:8576"
/db_xref="MIM:603074"
/translation="MSGEENPASKPTPVQDVQGDGRWMSLHHRFVADSKDKEPEVVFI
GDSLVQLMHQCEIWRELFSPLHALNFGIGGDGTQHVLWRLENGELEHIRPKIVVVWVG
TNNHGHTAEQVTGGIKAIVQLVNERQPQARVVVLGLLPRGQHPNPLREKNRQVNELVR
AALAGHPRAHFLDADPGFVHSDGTISHHDMYDYLHLSRLGYTPVCRALHSLLLRLLAQ
DQGQGAPLLEPAP"
BASE COUNT 205 a 312 c 314 g 190 t
ORIGIN
1 cgggaagcgc cgggcgagcc cactgtgcgg ccgtcgtggg ggaagcgaag gttcctgatt
61 ccacctacct cctaagtgaa ggcttccgtc cctggagagg aggcggcgcc ctgtatcggc
121 cttcgtcctc cgcgggtgtg ctagcgttgg gacggtcctt tgttgccgcg aggggtagga
181 gtgggcgtgg cggagccagc tccgttcgga acactcccgg gccgacccga ctcgctcatc
241 ctgcaggagc tgcggcgcca agatgagtgg agaggagaac ccagccagca agcccacgcc
301 ggtgcaggac gtacagggcg acgggcgctg gatgtccctg caccatcggt tcgtggctga
361 cagcaaagat aaggaacccg aagtcgtctt catcggggac tccttggtcc agctcatgca
421 ccagtgcgag atctggcgcg agctcttctc tcctctgcat gcacttaact ttggcattgg
481 tggtgacggc acacagcatg tactgtggcg gctggagaat ggggagctgg aacacatccg
541 gcccaagatt gtggtggtct gggtgggcac caacaaccac ggacacacag cagagcaggt
601 gactggtggc atcaaggcca ttgtgcaact ggtgaatgag cgacagcccc aggcccgggt
661 tgtggtgctg ggcctgcttc cgcgaggcca acatcccaac ccacttcggg agaagaaccg
721 acaggtgaac gagctggtac gggcggcact ggctggccac cctcgggccc acttcctaga
781 tgccgaccct ggctttgtgc actcagatgg caccatcagc catcatgaca tgtatgatta
841 cctgcatctg agccgcctgg gctacacacc tgtttgccgg gctctgcact ccctgcttct
901 gcgtctgctg gcccaagacc agggccaagg tgctcccctg ctggagcccg caccctaagc
961 atcctgctgc cttcccacaa cattaaactc tccttcctca gtgaaaaaaa aaaaaaaaaa
1021 a
//