LOCUS BC003008 2013 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens poly(rC) binding protein 4, mRNA (cDNA clone MGC:4008
IMAGE:2822683), complete cds.
ACCESSION BC003008
VERSION BC003008.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2013)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2013)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: l Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14670368.
FEATURES Location/Qualifiers
source 1..2013
/db_xref="H-InvDB:HIT000031355"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4008 IMAGE:2822683"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2013
/gene="PCBP4"
/gene_synonym="LIP4"
/gene_synonym="MCG10"
/db_xref="GeneID:57060"
/db_xref="HGNC:HGNC:8652"
/db_xref="MIM:608503"
CDS 169..1380
/gene="PCBP4"
/gene_synonym="LIP4"
/gene_synonym="MCG10"
/codon_start=1
/product="poly(rC) binding protein 4"
/protein_id="AAH03008.1"
/db_xref="GeneID:57060"
/db_xref="HGNC:HGNC:8652"
/db_xref="MIM:608503"
/translation="MSGSDGGLEEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIR
EQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPV
TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAII
LCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ
LSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIK
IGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPSSAPADLPAPFSPP
LTALPTAPPGLLGTPYAISLSNFIGLKPMPFLALPPASPGPPPGLAAYTAKMAAANGS
KKAERQKFSPY"
BASE COUNT 403 a 659 c 577 g 374 t
ORIGIN
1 gtcactcgca gttgtgagcg gccgcctctc ccggggacaa tgtgggactg agcggcccag
61 ccgccgtgcc gccgccgccg ccgccgcagg acagccccag cgagagccgg ccaggttgca
121 gcgcggacac actcgcaggt cgctgtggcc ccagcctcgc ctgacagaat gagcggctcg
181 gacgggggac tggaggagga gccagagctc agcatcaccc tcacgctgcg gatgctgatg
241 cacgggaagg aagtgggcag catcatcggg aagaagggcg agactgtaaa gcgaatccgg
301 gagcagagca gtgcccggat caccatctcc gagggctcct gccctgaacg catcaccacc
361 atcaccgggt ctacagcagc tgtcttccat gcagtctcca tgattgcttt caaactggat
421 gaggaccttt gtgctgctcc tgcaaatggt ggaaatgtct ccaggcctcc agtgaccctg
481 cgccttgtca tccctgccag tcagtgtggc tcactgattg ggaaggctgg caccaagatc
541 aaggagatcc gagagactac gggtgcccag gtacaggtgg caggggacct gctccccaac
601 tccacagagc gagctgttac ggtatctggg gtgcctgatg ccatcatcct gtgtgtgcgc
661 cagatctgcg ctgttatcct ggagtcccca cccaaaggag ccactatccc ctaccatccg
721 agcctctccc taggtactgt tcttctctct gccaaccagg gcttctctgt ccagggtcag
781 tatggggctg tgaccccagc tgaggtcacc aagctccagc agctctcaag ccatgcggtc
841 ccctttgcca cacccagcgt ggtgccagga ctggatcccg gcacacagac cagctcacag
901 gagttcttgg ttcccaacga tttgattggc tgtgtgatcg ggcgccaggg cagcaagatc
961 agcgagatcc ggcagatgtc aggggcacat atcaagatcg ggaaccaagc agagggcgct
1021 ggggagcggc atgtcaccat cactggctct ccggtctcca tcgccctggc ccagtacctc
1081 atcactgcct gtctagagac ggccaagtct acctctgggg ggacgcccag ctcggccccc
1141 gcagacctgc ctgccccctt ctcgccaccc ctgacggccc tgcccacagc tccccctggc
1201 ctgctgggca caccctatgc catctccctc tccaacttca tcggcctcaa gcccatgccc
1261 ttcttggctt taccacctgc ttccccaggg ccgccgccgg gcttggcggc ctacactgcc
1321 aagatggcag cagctaatgg gagcaagaag gctgagcggc agaaattctc cccctactga
1381 ggccagctga ggtacaggca ggggcaggca ggaccaccag cagggggctg cctctgcacc
1441 ctacccgccc aaggagactc caccctgggg tcccaaacgc cgctaacgcc cagacgcatg
1501 gatgcacccc ctaccctgcc tccatctatg ggagttcttt ctctcagagt gggggcagtt
1561 tctggcccag gggtctgagc tgcggcagcc ccagggcagg gggccctacc tcctcagctc
1621 tgtgcttgga tacagggagc agccaggaga ctccctagtg cccccaccat ggcgggtgtc
1681 actcacgcac tccccatccc ttagggcttc ctggcctact gcatccttgt gggagtcagg
1741 gaggagggcc cgttgggtag ctggggccag gcttctctcc ccaccacctg cagatttctt
1801 gctgcttcca ctgataccct tttgactgga atgaactggc tgggcttgtc agggggcacc
1861 ccaaagaggg ggcactgcca ggtagctggg ggagtggcat ggggcagggg cccagttctc
1921 agcagcagac actctgtaca gttttttcaa tccctgtttt tgaataaata ttctcagcga
1981 ccaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//