LOCUS BC003001 2279 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens surfeit 6, mRNA (cDNA clone IMAGE:2820773), partial
cds.
ACCESSION BC003001
VERSION BC003001.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2279)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2279)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: n Column: 1.
FEATURES Location/Qualifiers
source 1..2279
/db_xref="H-InvDB:HIT000086202"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2820773"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2279
/gene="SURF6"
/gene_synonym="FLJ30322"
/db_xref="GeneID:6838"
/db_xref="HGNC:HGNC:11478"
/db_xref="MIM:185642"
CDS <1..1091
/gene="SURF6"
/gene_synonym="FLJ30322"
/codon_start=3
/product="SURF6 protein"
/protein_id="AAH03001.1"
/db_xref="GeneID:6838"
/db_xref="HGNC:HGNC:11478"
/db_xref="MIM:185642"
/translation="AMASLLAKDAYLQSLAKKICSHSAPEQQARTRAGKTQGSETAGP
PKKKRKKTQKKFRKREEKAAEHKAKSLGEKSPAASGARRPEAAKEEAAWASSSAGNPA
DGLATEPESVFALDVLRQRLHEKIQEARGQGSAKELSPAALEKRRRRKQERDRKKRKR
KELRAKEKARKAEEATEAQEVVEATPEGACTEPREPPGLIFNKVEVSEDEPASKAQRR
KEKRQRVKGNLTPLTGRNYRQLLERLQARQSRLDELRGQDEGKAQELEAKMKWTNLLY
KAEGVKIRDDERLLQEALKRKEKRRAQRQRRWEKRTAGVVEKMQQRQDRRRQNLRRKK
AARAERRLLRARKKGRILPQDLERAGLV"
BASE COUNT 608 a 563 c 749 g 359 t
ORIGIN
1 ccgccatggc ctctctactc gccaaggacg cctacctgca gagcctggcc aagaagatct
61 gctcccattc ggccccggaa cagcaggcgc gcacgcgggc tggcaaaact caaggctcag
121 aaactgcagg gcccccaaaa aagaaaagga agaaaacaca aaagaaattc cggaagcgag
181 aagagaaggc tgctgagcac aaggccaagt ccttggggga gaaatctcca gcagcctctg
241 gggccaggag gcctgaggca gccaaagagg aagcagcttg ggcttccagc tcagcaggga
301 accctgcaga tggcctggcc actgagcctg agtctgtctt tgctctggat gttctgcgac
361 agcgactgca tgagaagatc caggaggccc ggggccaggg cagtgccaag gagctgtccc
421 ctgccgcctt ggagaaaagg cggcggagaa agcaggaacg ggaccggaag aagaggaagc
481 gaaaggagct gcgggcgaaa gagaaggcca ggaaggctga ggaggccacg gaggcccagg
541 aggtggtgga ggcaacccca gagggggcct gcacggagcc gcgggagccg cccgggctga
601 tcttcaataa ggtggaggtg agcgaagacg agccggccag caaggcgcag cgcagaaaag
661 agaagaggca gagggtgaag gggaacctca cgccgctgac cgggaggaac taccggcagc
721 tgctggagcg cctgcaggca cggcagagcc ggctggacga gctgcgcggc caggatgagg
781 ggaaggcgca ggagctggag gcgaagatga agtggaccaa cctcctctac aaggcggagg
841 gcgtgaagat ccgtgacgac gaacgcctgc tgcaggaggc cctgaagcgc aaggagaagc
901 gcagggcgca gcggcagcgc cggtgggaga agcgcacggc cggcgtggtg gagaagatgc
961 agcagcgcca ggaccggcgg cggcagaacc tgcgcaggaa gaaggcggcc cgcgccgagc
1021 gccgcctgct cagagcccgc aagaagggcc gcatcctgcc gcaggacctg gagcgcgcag
1081 gcctggtctg agtctttccc acctggggcc gccgtcttcc gtcctaggag actccaggac
1141 accctctgag tccttgacgc tggctctgtc ccaggatctc cacagacctc ggcctctcca
1201 tgtgaggggg acacagtggt gctctgctga gttgtgaggg cccagatcac agatcccatg
1261 tgagaaagag agagtttcag cgtcatcctt gaacgcagga tccgggacct tcagacccag
1321 ggaaagggtg agggagactg gggcctggtc tgctttcccg ggcctgaaag cttccccgag
1381 gtttgcaggg tcagggagga ggaacggtgg gggtgggcag tcactgcctg ttccccactg
1441 cctgtgttcg caggagccac gggacagaag acggtggcct ctgctgccgg gccacgttag
1501 tccgcagctc acccgaacag aggacaaccc tgaggtgtgg catatgggca cctggcactg
1561 ggagtcgggg gagcacgtcc aggcgtggtg catcctgggg cagaacgcca tggctcctcc
1621 ccgctctctt ggcttctgcc tgttggggtc tcattccttt ctgttcccca gtgccccggg
1681 gcggcatttt actgctcaga atttggaggg agggagcagt accttcccgg agtccacgca
1741 tgtgagttgg gtcaagtgca ttggacctag ggaaagagaa agaaagaata aaagctggag
1801 agagagtgaa gtgaatgcaa gatacaaagt gggatggaag aattaaatcc agagttccag
1861 gcaatcaaaa tgagtgcagg ttgaaagaaa acaggtgaat tttagtggca tatggatgat
1921 aaagctgtaa ataaaattct tttgatgaaa ctctccggtt atgagacaaa gactgtaact
1981 gaacaggagc tggtgtgact gttaccagac agaggcaact gatgaaaaag ccctgtgaaa
2041 gataggatgt gaggtgagca tgagcttgag ctgagagaca gacacaacag tatctgaaaa
2101 gaatacatac tctttccatg catatatgga acatggatgg aaactgacca cctactttgt
2161 ccagaaaaga agtcttaaga tatttcaagg aatcagtgtc gttatctgac cgtatcccaa
2221 tgtcattaaa aaaaatttga gctaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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