LOCUS BC002997 2928 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) 26S subunit,
non-ATPase, 2, mRNA (cDNA clone MGC:3871 IMAGE:2905429), complete
cds.
ACCESSION BC002997
VERSION BC002997.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2928)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2928)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: i Column: 22.
FEATURES Location/Qualifiers
source 1..2928
/db_xref="H-InvDB:HIT000031345"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3871 IMAGE:2905429"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2928
/gene="PSMD2"
/gene_synonym="MGC14274"
/gene_synonym="P97"
/gene_synonym="S2"
/gene_synonym="TRAP2"
/db_xref="GeneID:5708"
/db_xref="HGNC:HGNC:9559"
/db_xref="MIM:606223"
CDS 23..2749
/gene="PSMD2"
/gene_synonym="MGC14274"
/gene_synonym="P97"
/gene_synonym="S2"
/gene_synonym="TRAP2"
/codon_start=1
/product="proteasome (prosome, macropain) 26S subunit,
non-ATPase, 2"
/protein_id="AAH02997.1"
/db_xref="GeneID:5708"
/db_xref="HGNC:HGNC:9559"
/db_xref="MIM:606223"
/translation="MEEGGRDKAPVQPQQSPAAAPGGTDEKPSGKERRDAGDKDKEQE
LSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPH
YGKLKEIYENMAPGENKRFAADIISVLAMTMSGERECLKYRLVGSQEELASWGHEYVR
HLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLE
KDIDENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDME
LVEDIFTSCKDVVVQKQMAFMLGRHGVFLELSEDVEEYEDLTEIMSNVQLNSNFLALA
RELDIMEPKVPDDIYKTHLENNRFGGSGSQVDSARMNLASSFVNGFVNAAFGQDKLLT
DDGNKWLYKNKDHGMLSAAASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGI
VNSGVRNECDPALALLSDYVLHNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVMGDS
KSSMEVAGVTALACGMIAVGSCNGDVTSTILQTIMEKSETELKDTYARWLPLGLGLNH
LGKGEAIEAILAALEVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHICSEHFDSKE
KEEDKDKKEKKDKDKKEAPADMGAHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYG
EPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSYNSIFAMGMVGSGTNNAR
LAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCPYHSDRQLMSQVAVAGLLT
VLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQAVDVVGQA
GKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRKNPNYDL"
BASE COUNT 713 a 692 c 847 g 676 t
ORIGIN
1 cgggccggca gtggcggcgg agatggagga gggaggccgg gacaaggcgc cggtgcagcc
61 ccagcagtct ccagcggcgg cccccggcgg cacggacgag aagccgagcg gcaaggagcg
121 gcgggatgcc ggggacaagg acaaagaaca ggagctgtct gaagaggata aacagcttca
181 agatgaactg gagatgctcg tggaacgact aggggagaag gatacatccc tgtatcgacc
241 agcgctggag gaattgcgaa ggcagattcg ttcttctaca acttccatga cttcagtgcc
301 caagcctctc aaatttctgc gtccacacta tggcaaactg aaggaaatct atgagaacat
361 ggcccctggg gagaataagc gttttgctgc tgacatcatc tccgttttgg ccatgaccat
421 gagtggggag cgtgagtgcc tcaagtatcg gctagtgggc tcccaggagg aattggcatc
481 atggggtcat gagtatgtca ggcatctggc aggagaagtg gctaaggagt ggcaggagct
541 ggatgacgca gagaaggtcc agcgggagcc tctgctcact ctggtgaagg aaatcgtccc
601 ctataacatg gcccacaatg cagagcatga ggcttgcgac ctgcttatgg aaattgagca
661 ggtggacatg ctggagaagg acattgatga aaatgcatat gcaaaggtct gcctttatct
721 caccagttgt gtgaattacg tgcctgagcc tgagaactca gccctactgc gttgtgccct
781 gggtgtgttc cgaaagttta gccgcttccc tgaagctctg agattggcat tgatgctcaa
841 tgacatggag ttggtagaag acatcttcac ctcctgcaag gatgtggtag tacagaaaca
901 gatggcattc atgctaggcc ggcatggggt gttcctggag ctgagtgaag atgtcgagga
961 gtatgaggac ctgacagaga tcatgtccaa tgtacagctc aacagcaact tcttggcctt
1021 agctcgggag ctggacatca tggagcccaa ggtgcctgat gacatctaca aaacccacct
1081 agagaacaac aggtttgggg gcagtggctc tcaggtggac tctgcccgca tgaacctggc
1141 ctcctctttt gtgaatggct ttgtgaatgc agcttttggc caagacaagc tgctaacaga
1201 tgatggcaac aaatggcttt acaagaacaa ggaccacgga atgttgagtg cagctgcatc
1261 tcttgggatg attctgctgt gggatgtgga tggtggcctc acccagattg acaagtacct
1321 gtactcctct gaggactaca ttaagtcagg agctcttctt gcctgtggca tagtgaactc
1381 tggggtccgg aatgagtgtg accctgctct ggcactgctc tcagactatg ttctccacaa
1441 cagcaacacc atgagacttg gttccatctt tgggctaggc ttggcttatg ctggctcaaa
1501 tcgtgaagat gtcctaacac tgctgctgcc tgtgatggga gattcaaagt ccagcatgga
1561 ggtggcaggt gtcacagctt tagcctgtgg aatgatagca gtagggtcct gcaatggaga
1621 tgtaacttcc actatccttc agaccatcat ggagaagtca gagactgagc tcaaggatac
1681 ttatgctcgt tggcttcctc ttggactggg tctcaaccac ctggggaagg gtgaggccat
1741 cgaggcaatc ctggctgcac tggaggttgt gtcagagcca ttccgcagtt ttgccaacac
1801 actggtggat gtgtgtgcat atgcaggctc tgggaatgtg ctgaaggtgc agcagctgct
1861 ccacatttgt agcgaacact ttgactccaa agagaaggag gaagacaaag acaagaagga
1921 aaagaaagac aaggacaaga aggaagcccc tgctgacatg ggagcacatc agggagtggc
1981 tgttctgggg attgccctta ttgctatggg ggaggagatt ggtgcagaga tggcattacg
2041 aacctttggc cacttgctga gatatgggga gcctacactc cggagggctg tacctttagc
2101 actggccctc atctctgttt caaatccacg actcaacatc ctggataccc taagcaaatt
2161 ctctcatgat gctgatccag aagtttccta taactccatt tttgccatgg gcatggtggg
2221 cagtggtacc aataatgccc gtctggctgc aatgctgcgc cagttagctc aatatcatgc
2281 caaggaccca aacaacctct tcatggtgcg cttggcacag ggcctgacac atttagggaa
2341 gggcaccctt accctctgcc cctaccacag cgaccggcag cttatgagcc aggtggccgt
2401 ggctggactg ctcactgtgc ttgtctcttt cctggatgtt cgaaacatta ttctaggcaa
2461 atcacactat gtattgtatg ggctggtggc tgccatgcag ccccgaatgc tggttacgtt
2521 tgatgaggag ctgcggccat tgccagtgtc tgtccgtgtg ggccaggcag tggatgtggt
2581 gggccaggct ggcaagccga agactatcac agggttccag acgcatacaa ccccagtgtt
2641 gttggcccac ggggaacggg cagaattggc cactgaggag tttcttcctg ttacccccat
2701 tctggaaggt tttgttatcc ttcggaagaa ccccaattat gatctctaag tgaccaccag
2761 gggctctgaa ctgcagctga tgttatcagc aggccatgca tcctgctgcc aagggtggac
2821 acggctgcag acttctgggg gaattgtcgc ctcctgctct tttgttactg agtgagataa
2881 ggttgttcaa taaagacttt tatccccaaa aaaaaaaaaa aaaaaaaa
//