LOCUS BC002995 1312 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens stratifin, mRNA (cDNA clone MGC:3828 IMAGE:2822397), complete cds. ACCESSION BC002995 VERSION BC002995.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1312) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1312) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 9 Row: h Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 45238846. FEATURES Location/Qualifiers source 1..1312 /db_xref="H-InvDB:HIT000031343" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:3828 IMAGE:2822397" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1312 /gene="SFN" /db_xref="GeneID:2810" /db_xref="HGNC:HGNC:10773" /db_xref="MIM:601290" CDS 52..798 /gene="SFN" /codon_start=1 /product="stratifin" /protein_id="AAH02995.1" /db_xref="GeneID:2810" /db_xref="HGNC:HGNC:10773" /db_xref="MIM:601290" /translation="MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLL SVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGL LDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKK EMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTL IMQLLRDNLTLWTADNAGEEGGEAPQEPQS" BASE COUNT 276 a 406 c 405 g 225 t ORIGIN 1 ttggtcccag gcagcagtta gcccgccgcc cgcctgtgtg tccccagagc catggagaga 61 gccagtctga tccagaaggc caagctggca gagcaggccg aacgctatga ggacatggca 121 gccttcatga aaggcgccgt ggagaagggc gaggagctct cctgcgaaga gcgaaacctg 181 ctctcagtag cctataagaa cgtggtgggc ggccagaggg ctgcctggag ggtgctgtcc 241 agtattgagc agaaaagcaa cgaggagggc tcggaggaga aggggcccga ggtgcgtgag 301 taccgggaga aggtggagac tgagctccag ggcgtgtgcg acaccgtgct gggcctgctg 361 gacagccacc tcatcaagga ggccggggac gccgagagcc gggtcttcta cctgaagatg 421 aagggtgact actaccgcta cctggccgag gtggccaccg gtgacgacaa gaagcgcatc 481 attgactcag cccggtcagc ctaccaggag gccatggaca tcagcaagaa ggagatgccg 541 cccaccaacc ccatccgcct gggcctggcc ctgaactttt ccgtcttcca ctacgagatc 601 gccaacagcc ccgaggaggc catctctctg gccaagacca ctttcgacga ggccatggct 661 gatctgcaca ccctcagcga ggactcctac aaagacagca ccctcatcat gcagctgctg 721 cgagacaacc tgacactgtg gacggccgac aacgccgggg aagagggggg cgaggctccc 781 caggagcccc agagctgagt gttgcccgcc accgccccgc cctgccccct ccagtccccc 841 accctgccga gaggactagt atggggtggg aggccccacc cttctcccct aggcgctgtt 901 cttgctccaa agggctccgt ggagagggac tggcagagct gaggccacct ggggctgggg 961 atcccactct tcttgcagct gttgagcgca cctaaccact ggtcatgccc ccacccctgc 1021 tctccgcacc cgcttcctcc cgaccccagg accaggctac ttctcccctc ctcttgcctc 1081 cctcctgccc ctgctgcctc tgatcgtagg aattgaggag tgtcccgcct tgtggctgag 1141 aactggacag tggcaggggc tggagatggg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg 1201 cgcgcgcgcc agtgcaagac cgagattgag ggaaagcatg tctgctgggt gtgaccatgt 1261 ttcctctcaa taaagttccc ctgtgacact caaaaaaaaa aaaaaaaaaa aa //