LOCUS BC002989 2238 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens small glutamine-rich tetratricopeptide repeat
(TPR)-containing, alpha, mRNA (cDNA clone MGC:3636 IMAGE:2821268),
complete cds.
ACCESSION BC002989
VERSION BC002989.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2238)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2238)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: j Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38788107.
FEATURES Location/Qualifiers
source 1..2238
/db_xref="H-InvDB:HIT000050418"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3636 IMAGE:2821268"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2238
/gene="SGTA"
/gene_synonym="hSGT"
/db_xref="GeneID:6449"
/db_xref="HGNC:HGNC:10819"
/db_xref="MIM:603419"
CDS 51..992
/gene="SGTA"
/gene_synonym="hSGT"
/codon_start=1
/product="small glutamine-rich tetratricopeptide repeat
(TPR)-containing, alpha"
/protein_id="AAH02989.2"
/db_xref="GeneID:6449"
/db_xref="HGNC:HGNC:10819"
/db_xref="MIM:603419"
/translation="MDNKKRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFG
VTVEDSDLALPQTLPEIFEAAATGKEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQM
KVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSK
AYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREAPSPTGGVGS
FDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMISGGNNPLGTPGTSPSQNDLASLIQA
GQQFAQQMQQQNPELIEQLRSQIRSRTPSASNDDQQE"
BASE COUNT 459 a 708 c 661 g 410 t
ORIGIN
1 gtgggtcggg gatcggtcgc ctgagaggta tcacctcttc tgggctcaag atggacaaca
61 agaagcgcct ggcctacgcc atcatccagt tcctgcatga ccagctccgg cacgggggcc
121 tctcgtccga tgctcaggag agcttggaag tcgccatcca gtgcctggag actgcgtttg
181 gggtgacggt agaagacagt gaccttgcgc tccctcagac tctgccggag atatttgaag
241 cggctgccac gggcaaggag atgccgcagg acctgaggag ccccgcgcga accccgcctt
301 ccgaggagga ctcagcagag gcagagcgcc tcaaaaccga aggaaacgag cagatgaaag
361 tggaaaactt tgaagctgcc gtgcatttct acggaaaagc catcgagctc aacccagcca
421 acgccgtcta tttctgcaac agagccgcag cctacagcaa actcggcaac tacgcaggcg
481 cggtgcagga ctgtgagcgg gccatctgca ttgacccggc ctacagcaag gcctacggca
541 ggatgggcct ggcgctctcc agcctcaaca agcacgtgga ggccgtggct tactacaaga
601 aggctctgga gctggacccc gacaacgaga catacaagtc caacctcaag atagcggagc
661 tgaagctgcg ggaggccccc agccccacgg gaggcgtggg cagcttcgac atcgccggcc
721 tgctgaacaa ccctggcttc atgagcatgg cttcgaacct aatgaacaat ccccagattc
781 agcagctcat gtccggcatg atttcgggtg gcaacaaccc cttgggaact cccggcacca
841 gcccctcgca gaacgacctg gccagcctca tccaggcggg ccagcagttt gcccagcaga
901 tgcagcagca gaacccagag ttgatagagc agctcaggag ccagatccgg agtcggacgc
961 ccagcgccag caacgacgac cagcaggagt gacgctgcct gctcccggtg tgaccgcgtc
1021 cttccctggc cgacccgaag gaagccttct ggttgtctgc cacttcctcc tgttggactg
1081 cctgagagag gggaagagag agacctcgga cctgcatgtc aagatggatt ttcccctttt
1141 atctctgccc tcctccactc cctttttgta actcccttac agcccccaga cccttcttga
1201 aacgagagcc agcaagctga gcacagacca gcagcgacct cccttccagc ccccagaaag
1261 ctcggtcact tgagtgtttt ctagaatcct ggggtgctcc cgggccgctc tcagagaagt
1321 ggcaggtttc acgttcagcc gtgtggcgga tcgtgtggct tccaaagcct tttacagccc
1381 ccgcccccca tcccgtggtc tgtctgcagg aactctcccg tctgtgagaa gcctctttcc
1441 gagtcgacct cccggccacc ccggccctgt gcctgctcgg aagagctcac tgccagctgc
1501 ggcctgggca ccgcgggcca tgtgtgtttg catgaggaac tctttagtgg cagacaccta
1561 agagacggct gcggtcaccc cacgcctccg cggctcagga gccgtcctgg gtgcatagga
1621 ccagtttctg tgacttttct ccagttgggc atgttgacag acatgtttcc cctcctccca
1681 ccctcatttt ctggtcctcg cgactgagag ccaggggcga catcatgacc ttctgtcccg
1741 gccgccttag ccccgggcac agggaaggca gctgggccgt ttctgtctgt gtcccatcct
1801 gctgtccttc tgtcctggat gtttcatggg cccggggccc cccagggaag cttacccctc
1861 ctgtgctggg tggaggccac gggacacctc aggtgccacc caccttggcc ctaaaacagc
1921 caccaggaaa gcagccggag agccggacag caggcagcct gtctgggttc ctgaggcctg
1981 ggggtggcag acgagcccac ggcgccgtgg tcccagcagc agggttgtca gtcggagcat
2041 cctggggctc cctggctcct ggccgtctgt gaggtaggcg cagtaccgtg tatcgtaggt
2101 agcagtagga acgggggccg ccgcggccct gcagccgctc atggcggtga ggtgtgtgcc
2161 aagcccaccc ggggtgcagg gcgtgacgtg tggggaataa ataggcgttg tgaaaaaaaa
2221 aaaaaaaaaa aaaaaaaa
//