LOCUS BC002987 2137 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens stress-induced-phosphoprotein 1, mRNA (cDNA clone
MGC:3516 IMAGE:2823157), complete cds.
ACCESSION BC002987
VERSION BC002987.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2137)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2137)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: g Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5803180.
FEATURES Location/Qualifiers
source 1..2137
/db_xref="H-InvDB:HIT000031338"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3516 IMAGE:2823157"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2137
/gene="STIP1"
/gene_synonym="HOP"
/gene_synonym="IEF-SSP-3521"
/gene_synonym="P60"
/gene_synonym="STI1"
/gene_synonym="STI1L"
/db_xref="GeneID:10963"
/db_xref="HGNC:HGNC:11387"
/db_xref="MIM:605063"
CDS 63..1694
/gene="STIP1"
/gene_synonym="HOP"
/gene_synonym="IEF-SSP-3521"
/gene_synonym="P60"
/gene_synonym="STI1"
/gene_synonym="STI1L"
/codon_start=1
/product="stress-induced-phosphoprotein 1"
/protein_id="AAH02987.1"
/db_xref="GeneID:10963"
/db_xref="HGNC:HGNC:11387"
/db_xref="MIM:605063"
/translation="MEQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNR
SAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHE
ANNPQLKEGLQNMEARLAERKFMNPFNMPNLYQKLESDPRTRTLLSDPTYRELIEQLR
NKPSDLGTKLQDPRIMTTLSVLLGVDLGSMDEEEEIATPPPPPPPKKETKPEPMEEDL
PENKKQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYN
KCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPD
VLKKCQQAEKILKEQERLAYINPDLALEEKNKGNECFQKGDYPQAMKHYTEAIKRNPK
DAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDV
YQKALDLDSSCKEAADGYQRCMMAQYNRHDSPEDVKRRAMADPEVQQIMSDPAMRLIL
EQMQKDPQALSEHLKNPVIAQKIQKLMDVGLIAIR"
BASE COUNT 630 a 537 c 567 g 403 t
ORIGIN
1 gtgcggttgg gaacgcggag cggacggatt cgattcaacg gggttccgga ccgcgctgcg
61 ctatggagca ggtcaatgag ctgaaggaga aaggcaacaa ggccctgagc gtgggtaaca
121 tcgatgatgc cttacagtgc tactccgaag ctattaagct ggatccccac aaccacgtgc
181 tgtacagcaa ccgttctgct gcctatgcca agaaaggaga ctaccagaag gcttatgagg
241 atggctgcaa gactgtcgac ctaaagcctg actggggcaa gggctattca cgaaaagcag
301 cagctctaga gttcttaaac cgctttgaag aagccaagcg aacctatgag gagggcttaa
361 aacacgaggc aaataaccct caactgaaag agggtttaca gaatatggag gccaggttgg
421 cagagagaaa attcatgaac cctttcaaca tgcctaatct gtatcagaag ttggagagtg
481 atcccaggac aaggacacta ctcagtgatc ctacctaccg ggagctgata gagcagctac
541 gaaacaagcc ttctgacctg ggcacgaaac tacaagatcc ccggatcatg accactctca
601 gcgtcctcct tggggtcgat ctgggcagta tggatgagga ggaagagatt gcaacacctc
661 caccaccacc ccctcccaaa aaggagacca agccagagcc aatggaagaa gatcttccag
721 agaataagaa gcaggcactg aaagaaaaag agctggggaa cgatgcctac aagaagaaag
781 actttgacac agccttgaag cattacgaca aagccaagga gctggacccc actaacatga
841 cttacattac caatcaagca gcggtatact ttgaaaaggg cgactacaat aagtgccggg
901 agctttgtga gaaggccatt gaagtgggga gagaaaaccg agaagactat cgacagattg
961 ccaaagcata tgctcgaatt ggcaactcct acttcaaaga agaaaagtac aaggatgcca
1021 tccatttcta taacaagtct ctggcagagc accgaacccc agatgtgctc aagaaatgcc
1081 agcaggcaga gaaaatcctg aaggagcaag agcggctggc ctacataaac cccgacctgg
1141 ctttggagga gaagaacaaa ggcaacgagt gttttcagaa aggggactat ccccaggcca
1201 tgaagcatta tacagaagcc atcaaaagga acccgaaaga tgccaaatta tacagcaatc
1261 gagctgcctg ctacaccaaa ctcctggagt tccagctggc actcaaggac tgtgaggaat
1321 gtatccagct ggagccgacc ttcatcaagg gttatacacg gaaagccgct gcgctggaag
1381 cgatgaagga ctacaccaaa gccatggatg tgtaccagaa ggcgctagac ctggactcca
1441 gctgtaagga ggcggcagac ggctaccagc gctgtatgat ggcgcagtac aaccggcacg
1501 acagccccga agatgtgaag cgacgagcca tggccgaccc tgaggtgcag cagatcatga
1561 gtgacccagc catgcgcctt atcctggaac agatgcagaa ggacccccag gcactcagcg
1621 aacacttaaa gaatcctgta atagcacaga agatccagaa gctgatggat gtgggtctga
1681 ttgcaattcg gtgatgactt gttcatcccc ccttcccttc gccctcatgt ggaaagagga
1741 gctgggaccg cggcgagcag cacggagcgg aagggagagc aggggagaga aggcctcatc
1801 tctctatatt tatacataac cccggggaag acacagagac tcgtacctgc gctgtttgtg
1861 ccgccgctgc ctctgggccc tcccagcaca cgcatggtct cttcaccgct gccctcgagt
1921 tccatgtctc tttcccctgc ccctagttgc tgtctcggct gctctcccat agttggtttt
1981 ttttttattt ggggcagtgg gcatgttatg gggaggggag ggggttcttc cagcctcagg
2041 tcccagctgt ctcacgttgt ttattctgcg tccccttctc caataaaaca agccagttgg
2101 gcgtggttat aaaaaaaaaa aaaaaaaaaa aaaaaaa
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