LOCUS BC002983 1227 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens splA/ryanodine receptor domain and SOCS box containing
2, mRNA (cDNA clone MGC:2519 IMAGE:3546861), complete cds.
ACCESSION BC002983
VERSION BC002983.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1227)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1227)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: p Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14249177.
FEATURES Location/Qualifiers
source 1..1227
/db_xref="H-InvDB:HIT000031334"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2519 IMAGE:3546861"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1227
/gene="SPSB2"
/gene_synonym="GRCC9"
/gene_synonym="MGC2519"
/gene_synonym="SSB-2"
/gene_synonym="SSB2"
/db_xref="GeneID:84727"
/db_xref="HGNC:HGNC:29522"
CDS 140..931
/gene="SPSB2"
/gene_synonym="GRCC9"
/gene_synonym="MGC2519"
/gene_synonym="SSB-2"
/gene_synonym="SSB2"
/codon_start=1
/product="splA/ryanodine receptor domain and SOCS box
containing 2"
/protein_id="AAH02983.1"
/db_xref="GeneID:84727"
/db_xref="HGNC:HGNC:29522"
/translation="MGQTALAGGSSSTPTPQALYPDLSCPEGLEELLSAPPPDLGAQR
RHGWNPKDCSENIEVKEGGLYFERRPVAQSTDGARGKRGYSRGLHAWEISWPLEQRGT
HAVVGVATALAPLQTDHYAALLGSNSESWGWDIGRGKLYHQSKGPGAPQYPAGTQGEQ
LEVPERLLVVLDMEEGTLGYAIGGTYLGPAFRGLKGRTLYPAVSAVWGQCQVRIRYLG
ERRAEPHSLLHLSRLCVRHNLGDTRLGQVSALPLPPAMKRYLLYQ"
BASE COUNT 284 a 365 c 382 g 196 t
ORIGIN
1 cttcagaggc ccggcgacct ccagggctgg gaagtcaacc gagctccctt ccaggtcaat
61 ccaaactgga gctcaacttt cagaagagaa agacgcccca gcaagcctct ttcggggagt
121 cctctagctc ctcacctcca tgggccagac agctctggca gggggcagca gcagcacccc
181 cacgccacag gccctgtacc ctgacctctc ctgtcccgag ggcttggaag agctgctgtc
241 tgcaccccct cctgacctgg gggcccagcg gcgccacggt tggaacccca aagactgttc
301 agagaacatc gaggtcaagg aaggagggtt gtactttgag cggcggcccg tggcccagag
361 cactgatggg gcccggggta agaggggcta ttcaaggggc ctgcacgcct gggagatcag
421 ctggccccta gagcagaggg gcacgcatgc cgtggtgggc gtggccacgg ccctcgcccc
481 gctgcagact gaccactacg cggcgctgct gggcagcaac agcgagtcgt ggggctggga
541 catcgggcgg gggaagctgt accatcagag caaggggccc ggagcccccc agtatccagc
601 gggaactcag ggtgagcagc tggaggtgcc agagagactg ctggtggttc tggacatgga
661 ggagggaact ctgggctacg ctattggggg cacctacctg gggccagcat tccgcggact
721 gaagggcagg accctctatc cggcagtaag cgctgtctgg ggccagtgcc aggtccgcat
781 ccgctacctg ggcgaaagga gagcggagcc acactccctt ctgcacctga gccgcctgtg
841 tgtgcgccac aacctggggg atacccggct cggccaggtg tctgccctgc ccttgccccc
901 tgccatgaag cgctacctgc tctaccagtg agccctgtga taccacagac tgtgctgagg
961 tcttgccacc acccctcccc ttggggaggt ggggaggcac tgctggccta gaccagctgc
1021 tgaaagctgg tgaggctgag cccctacccc aacccaagct ctgcggaaat caacagcccc
1081 agagccactt ggagggagga agaaagggag ccggcgttca aggctatgac agtctgctac
1141 gcaaaacatt ttttcaagta aaaatagtaa gagatgttgt tatagaaaaa aaaaaaaaaa
1201 aaaaaaaaaa aaaaaaaaaa aaaaaaa
//