LOCUS BC002977 2048 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RAB8A, member RAS oncogene family, mRNA (cDNA clone
MGC:2196 IMAGE:3547214), complete cds.
ACCESSION BC002977
VERSION BC002977.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2048)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2048)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: d Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40548385.
FEATURES Location/Qualifiers
source 1..2048
/db_xref="H-InvDB:HIT000031329"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2196 IMAGE:3547214"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2048
/gene="RAB8A"
/gene_synonym="RAB8"
/db_xref="GeneID:4218"
/db_xref="HGNC:HGNC:7007"
/db_xref="MIM:165040"
CDS 77..700
/gene="RAB8A"
/gene_synonym="RAB8"
/codon_start=1
/product="RAB8A, member RAS oncogene family"
/protein_id="AAH02977.1"
/db_xref="GeneID:4218"
/db_xref="HGNC:HGNC:7007"
/db_xref="MIM:165040"
/translation="MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGID
FKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNW
IRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVEN
AFFTLARDIKAKMDKKLEGNSPQGSNQGVKITPDQQKRSSFFRCVLL"
BASE COUNT 532 a 556 c 493 g 467 t
ORIGIN
1 gctcggtgct gatggacggt gctggtggcc agtggagagg cgctggccgc acttcccgtc
61 ggggagagag tgtaatatgg cgaagaccta cgattacctg ttcaagctgc tgctgatcgg
121 ggactcgggg gtggggaaga cctgtgtcct gttccgcttc tccgaggacg ccttcaactc
181 cacttttatc tccaccatag gaattgactt taaaattagg accatagagc tcgatggcaa
241 gagaattaaa ctgcagatat gggacacagc cggtcaggaa cggtttcgga cgatcacaac
301 ggcctactac aggggtgcaa tgggcatcat gctggtctac gacatcacca acgagaagtc
361 cttcgacaac atccggaact ggattcgcaa cattgaggag cacgcctctg cagacgtcga
421 aaagatgata ctcgggaaca agtgtgatgt gaatgacaag agacaagttt ccaaggaacg
481 gggagaaaag ctggccctcg actatggaat caagttcatg gagaccagcg cgaaggccaa
541 catcaatgtg gaaaatgcat ttttcactct cgccagagat atcaaagcaa aaatggacaa
601 aaaattggaa ggcaacagcc cccaggggag caaccaggga gtcaaaatca caccggacca
661 gcagaagagg agcagctttt tccgatgtgt tcttctgtga ggaacaccgc cttactctga
721 gcctcgctca gcccagctga ctgtgcctgt tctgagtgag cccctcactc agccggggcc
781 ctcccacctc caacgccccg cccacgccgc ggccaccggg cccacggcca ccagaatgca
841 attgagaaat cgtttatttt agtaactgtc tgatcttttt caactttgga gatggaataa
901 gttaaaaatt tgctattttt cctgtaacat ctgctgaacg ggcccaccca cacgttgtat
961 attcagagag agagagggag tcaaggtgtg accgtcgacc acagccagtg tcaggcctct
1021 gcctctgggc ctttgctttg tggcctcact gcaacacaaa gctccaccag gaggctggtt
1081 cacgtcccct accacggaag cgaggtccca gaaggccagc ggtggttcca ggagcaacag
1141 ctcccaaacc ctgagcaagg caaccgatcg ccaggaccag gaagcatcac ccaggagatt
1201 tggcgcccac ttccacctct tctctcagtt ttggacaagt gacaaaccat tttgccccct
1261 cactcttctt ttttaactgt taaaccaaag gaaagcacaa atgaaggaaa tcctgtgtaa
1321 agcattgaga aggaaagaag cctggagcag cctctcctgt ccacagccag gggttaggtc
1381 tgcaggcccg tctgcggtcc ccatcgagca tcaaggggac gctgtgtgtg ctgcaagtga
1441 ccccgaaaac aaccacagcc gtcacatggt cctcctgaag ttggggcacc ctcctctcag
1501 caccaaaatg gcccccactc cttcgtgtcc tcccgctatc tccaaatcgg acgttctttc
1561 tagctgagat ttttattttt ccacatctgt agtgccatga agcgattctg tctttgactt
1621 ccaatggcaa acctgggtga tcgggaacaa gcacgttgta cccttggctg gacatggcca
1681 agacacaagg cattccacgg cggcaagctg accgcacagc agtctggctt gattttcagc
1741 cgtcatcatt gggttctgtt ttgacagctc tgctgtccca tagggactgc gactgggacc
1801 aggtcaacca cgccaggggg gtgtcaccag ccttttcttt ttttctttct tttttttttt
1861 ttcctcctta agctgctgtc aatccaaacc attggcatca tcgtttcttt tcaattaaaa
1921 ccaacatatc agcaatagtc tgctctcccc gggaatctct aacatgctct gtttacatcg
1981 ataaatgcac ttaaggaaaa caaacaaatt aaagctcatc ttaaagtcca aaaaaaaaaa
2041 aaaaaaaa
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