LOCUS BC002970 2062 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 22 open reading frame 28, mRNA (cDNA clone
MGC:1849 IMAGE:3533883), complete cds.
ACCESSION BC002970
VERSION BC002970.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2062)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2062)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: i Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31542944.
FEATURES Location/Qualifiers
source 1..2062
/db_xref="H-InvDB:HIT000031325"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1849 IMAGE:3533883"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2062
/gene="C22orf28"
/gene_synonym="DJ149A16.6"
/gene_synonym="HSPC117"
/gene_synonym="RP1-149A16.6"
/db_xref="GeneID:51493"
/db_xref="HGNC:HGNC:26935"
CDS 70..1587
/gene="C22orf28"
/gene_synonym="DJ149A16.6"
/gene_synonym="HSPC117"
/gene_synonym="RP1-149A16.6"
/codon_start=1
/product="chromosome 22 open reading frame 28"
/protein_id="AAH02970.1"
/db_xref="GeneID:51493"
/db_xref="HGNC:HGNC:26935"
/translation="MSRSYNDELQFLEKINKNCWRIKKGFVPNMQVEGVFYVNDALEK
LMFEELRNACRGGGVGGFLPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAF
DMNDPEAVVSPGGVGFDINCGVRLLRTNLDESDVQPVKEQLAQAMFDHIPVGVGSKGV
IPMNAKDLEEALEMGVDWSLREGYAWAEDKEHCEEYGRMLQADPNKVSARAKKRGLPQ
LGTLGAGNHYAEIQVVDEIFNEYAAKKMGIDHKGQVCVMIHSGSRGLGHQVATDALVA
MEKAMKRDKIIVNDRQLACARIASPEGQDYLKGMAAAGNYAWVNRSSMTFLTRQAFAK
VFNTTPDDLDLHVIYDVSHNIAKVEQHVVDGKERTLLVHRKGSTRAFPPHHPLIAVDY
QLTGQPVLIGGTMGTCSYVLTGTEQGMTETFGTTCHGAGRALSRAKSRRNLDFQDVLD
KLADMGIAIRVASPKLVMEEAPESYKNVTDVVNTCHDAGISKKAIKLRPIAVIKG"
BASE COUNT 572 a 434 c 557 g 499 t
ORIGIN
1 agaagccgga ctacgcggca gcggctcttc aaagcggagc cgggagtttt tgctacagtt
61 ttcgccacca tgagtcgcag ctataatgat gagctgcagt tcttggagaa gatcaataaa
121 aactgctgga ggattaagaa gggcttcgtg cccaacatgc aggttgaagg tgttttctat
181 gtgaatgatg ctctggagaa attgatgttt gaggaattaa ggaatgcctg tcgaggtggt
241 ggtgttggtg gcttcctgcc agccatgaaa cagattggca atgtggcagc cctgcctgga
301 attgttcatc gatctattgg gcttcctgat gtccattcag gatatgggtt tgctattggg
361 aacatggcag cctttgatat gaatgaccct gaagcagtag tatccccagg tggtgtcggg
421 tttgacatca actgtggtgt ccgcttgcta agaaccaatt tagatgaaag tgatgtccag
481 cctgtgaagg agcaacttgc ccaagctatg tttgaccaca ttcctgttgg ggtggggtca
541 aaaggtgtca tcccaatgaa tgccaaagac ttggaggagg ccttggagat gggggtggac
601 tggtccttaa gagaagggta tgcctgggct gaagacaagg agcactgcga ggagtacgga
661 aggatgctgc aagctgaccc caataaagtt tctgcaaggg cgaagaaaag aggccttcct
721 cagttgggga ccctgggagc aggcaaccat tatgcagaaa tccaggttgt ggatgagatt
781 ttcaatgagt atgctgctaa aaaaatgggc atcgaccata agggacaggt gtgtgtgatg
841 atccacagtg gaagcagagg cttgggccac caagtagcca cagatgcgct ggtagctatg
901 gagaaggcca tgaagagaga caagattata gtcaatgatc ggcagttggc ttgtgctcga
961 atcgcttccc cagagggtca agactatctg aagggaatgg cagctgctgg gaactatgcc
1021 tgggtcaacc gctcttccat gaccttctta acccgtcagg ctttcgccaa ggtcttcaac
1081 acaacccctg atgacttgga cctacatgtg atctatgatg tttctcacaa cattgccaaa
1141 gtggagcagc atgtggtgga cggaaaggaa cggacactgt tagtacacag gaagggatcc
1201 acccgcgctt tccctcctca ccatcccctc attgctgttg attaccaact cactggacag
1261 ccagtgctca ttggtggcac catgggaacc tgtagttatg ttcttactgg cactgaacag
1321 ggcatgactg agacctttgg aacaacctgt catggagcgg gccgtgcatt gtcccgagca
1381 aaatctcgac gtaatttaga tttccaggat gtcttagaca aattggcaga tatgggaatt
1441 gcgatccgtg ttgcctcacc caaactggtt atggaagagg ctcctgagtc ctataagaat
1501 gtgacagatg tggtaaatac ctgccatgat gctggaatca gcaagaaagc cattaaactg
1561 agaccaattg ctgtgatcaa aggatagaac cttggacagc agggctgcct gacaccacca
1621 accctctctg aagtggaagt ggactgacat gctcttctga catcagactc aaggcgggac
1681 aagttgcaaa gtgtgcagct gtaactgctc acgccaaaat ggctgatggg gaggctgctg
1741 ctttcagggg cccgtgcttg taaaataacc ttccaggaag aggcacattg cccacctttg
1801 gaaagggagg aatatgcctt ctccttggtt gttccacaga gttttaggaa aatctgttag
1861 ggatgggtag atgtcaaact gccttacgca gtcatactga tctttagcca tcagattgat
1921 cttcttcaca ccaagctctg tttacattcc gagaggtgtc atgaagaaag ttctgttcaa
1981 taaggttttg gaatgtttcc ttttaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2041 aaaaaaaaaa aaaaacctcg gg
//