LOCUS BC002955 2070 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ubiquitin specific peptidase 2, mRNA (cDNA clone
MGC:1315 IMAGE:3543435), complete cds.
ACCESSION BC002955
VERSION BC002955.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2070)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2070)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: g Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5454161.
FEATURES Location/Qualifiers
source 1..2070
/db_xref="H-InvDB:HIT000031314"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1315 IMAGE:3543435"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2070
/gene="USP2"
/gene_synonym="UBP41"
/gene_synonym="USP9"
/db_xref="GeneID:9099"
/db_xref="HGNC:HGNC:12618"
/db_xref="MIM:604725"
CDS 177..1994
/gene="USP2"
/gene_synonym="UBP41"
/gene_synonym="USP9"
/codon_start=1
/product="ubiquitin specific peptidase 2"
/protein_id="AAH02955.1"
/db_xref="GeneID:9099"
/db_xref="HGNC:HGNC:12618"
/db_xref="MIM:604725"
/translation="MSQLSSTLKRYTESARYTDAHYAKSGYGAYTPSSYGANLAASLL
EKEKLGFKPVPTSSFLTRPRTYGPSSLLDYDRGRPLLRPDITGGGKRAESQTRGTERP
LGSGLSGGSGFPYGVTNNCLSYLPINAYDQGVTLTQKLDSQSDLARDFSSLRTSDSYR
IDPRNLGRSPMLARTRKELCTLQGLYQTASCPEYLVDYLENYGRKGSASQVPSQAPPS
RVPEIISPTYRPIGRYTLWETGKGQAPGPSRSSSPGRDGMNSKSAQGLAGLRNLGNTC
FMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWTSSPNDVV
SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPD
DEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGY
PEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSES
RIRTSKLTTFVNFPLRDLDLREFASENTNHAVYNLYAVSNHSGTTMGGHYTAYCRSPG
TGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPSRM"
BASE COUNT 482 a 656 c 527 g 405 t
ORIGIN
1 gtcaggcagg agccgaggcc ggggagccct cttcgtcagc tggtgctcac tgcgccgcgc
61 cagcgccagc cgggactcac ccgcagctcc atgcttgtgc ccggttcgac tcgtccatcc
121 tccaagaaga ggcagcccat gaggctccca gtccccactg agtgccaccc tgaaggatgt
181 cccagctctc ctccaccctg aagcgctaca cagaatcggc ccgctacaca gatgcccact
241 atgccaagtc gggctatggt gcctacaccc catcctccta tggggccaat ctggctgcct
301 ccttactgga gaaggagaaa cttggtttca agccggtccc caccagcagc ttcctcaccc
361 gtccccgtac ctatggcccc tcctccctcc tggactatga ccggggccgc cccctgctga
421 gacccgacat cactgggggt ggtaagcggg cagagagcca gacccggggt actgagcggc
481 ctttaggcag tggcctcagc gggggcagcg gattccctta tggagtgacc aacaactgcc
541 tcagctacct gcccatcaat gcctatgacc agggggtgac cctaacccag aagctggaca
601 gccaatcaga cctggcccgg gatttctcca gcctccggac ctcagatagc taccggatag
661 accccaggaa cctgggccgc agccccatgc tggcccggac gcgcaaggag ctctgcaccc
721 tgcaggggct ctaccagaca gccagctgcc ctgaatacct ggtcgactac ctggagaact
781 atggtcgcaa gggcagtgca tctcaggtgc cctcccaggc ccctccctca cgagtccctg
841 aaatcatcag cccaacctac cgacccattg gccgctacac gctgtgggag acgggaaagg
901 gtcaggcccc tgggcccagc cgctccagct ccccgggaag agacggcatg aattctaaga
961 gtgcccaggg tctggctggt cttcgaaacc ttgggaacac gtgcttcatg aactcaattc
1021 tgcagtgcct gagcaacact cgggagttga gagattactg cctccagagg ctctacatgc
1081 gggacctgca ccacggcagc aatgcacaca cagccctcgt ggaagagttt gcaaaactaa
1141 ttcagaccat atggacttca tcccccaatg atgtggtgag cccatctgag ttcaagaccc
1201 agatccagag atatgcaccg cgctttgttg gctataatca gcaggatgct caggagttcc
1261 ttcgctttct tctggatggg ctccataacg aggtgaaccg agtgacactg agacctaagt
1321 ccaaccctga gaacctcgat catcttcctg atgacgagaa aggccgacag atgtggagaa
1381 aatatctaga acgggaagac agtaggatcg gggatctctt tgttgggcag ctaaagagct
1441 cgctgacgtg tacagattgt ggttactgtt ctacggtctt cgaccccttc tgggacctct
1501 cactgcccat tgctaagcga ggttatcctg aggtgacatt aatggactgc atgaggctct
1561 tcaccaaaga ggatgtgctt gatggagatg aaaagccaac atgctgtcgc tgccgaggca
1621 gaaaacggtg tataaagaag ttctccatcc agaggttccc aaagatcttg gtgctccatc
1681 tgaagcggtt ctcagaatcc aggatccgaa ccagcaagct cacaacattt gtgaacttcc
1741 ccctaagaga cctggactta agagaatttg cctcagaaaa caccaaccat gctgtttaca
1801 acctgtacgc tgtgtccaat cactccggaa ccaccatggg tggccactat acagcctact
1861 gtcgcagtcc agggacagga gaatggcaca ctttcaacga ctccagcgtc actcccatgt
1921 cctccagcca agtgcgcacc agcgacgcct acctgctctt ctacgaactg gccagcccgc
1981 cctcccgaat gtagcgccag gagccacgtc ccttctccct tccccgtggt ggccccgctc
2041 cctaaatttt ttaaaaaaaa aaaaaaaaaa
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