LOCUS BC002923 2020 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens POT1 protection of telomeres 1 homolog (S. pombe),
mRNA (cDNA clone MGC:10280 IMAGE:3955573), complete cds.
ACCESSION BC002923
VERSION BC002923.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2020)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2020)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002923.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: g Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13123773.
FEATURES Location/Qualifiers
source 1..2020
/db_xref="H-InvDB:HIT000031292"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10280 IMAGE:3955573"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2020
/gene="POT1"
/gene_synonym="DKFZP586D211"
/gene_synonym="hPot1"
/db_xref="GeneID:25913"
/db_xref="HGNC:HGNC:17284"
/db_xref="MIM:606478"
CDS 58..1962
/gene="POT1"
/gene_synonym="DKFZP586D211"
/gene_synonym="hPot1"
/codon_start=1
/product="POT1 protection of telomeres 1 homolog (S.
pombe)"
/protein_id="AAH02923.1"
/db_xref="GeneID:25913"
/db_xref="HGNC:HGNC:17284"
/db_xref="MIM:606478"
/translation="MSLVPATNYIYTPLNQLKGGTIVNVYGVVKFFKPPYLSKGTDYC
SVVTIVDQTNVKLTCLLFSGNYEALPIIYKNGDIVRFHRLKIQVYKKETQGITSSGFA
SLTFEGTLGAPIIPRTSSKYFNFTTEDHKMVEALRVWASTHMSPSWTLLKLCDVQPMQ
YFDLTCQLLGKAEVDGASFLLKVWDGTRTPFPSWRVLIQDLVLEGDLSHIHRLQNLTI
DILVYDNHVHVARSLKVGSFLRIYSLHTKLQSMNSENQTMLSLEFHLHGGTSYGRGIR
VLPESNSDVDQLKKDLESANLTANQHSDVICQSEPDDSFPSSGSVSLYEVERCQQLSA
TILTDHQYLERTPLCAILKQKAPQQYRIRAKLRSYKPRRLFQSVKLHCPKCHLLQEVP
HEGDLDIIFQDGATKTPDVKLQNTSLYDSKIWTTKNQKGRKVAVHFVKNNGILPLSNE
CLLLIEGGTLSEICKLSNKFNSVIPVRSGHEDLELLDLSAPFLIQGTIHHYGCKQCSS
LRSIQNLNSLVDKTSWIPSSVAEALGIVPLQYVFVMTFTLDDGTGVLEAYLMDSDKFF
QIPASEVLMDDDLQKSVDMIMDMFCPPGIKIDAYPWLECFIKSYNVTNGTDNQICYQI
FDTTVAEDVI"
BASE COUNT 653 a 389 c 381 g 597 t
ORIGIN
1 ctcaaatcaa ctgtttatgt ttatgtcaaa tctttaagag atttttctac agaatcaatg
61 tctttggttc cagcaacaaa ttatatatat acacccctga atcaacttaa gggtggtaca
121 attgtcaatg tctatggtgt tgtgaagttc tttaagcccc catatctaag caaaggaact
181 gattattgct cagttgtaac tattgtggac cagacaaatg taaaactaac ttgcctgctc
241 tttagtggaa actatgaagc ccttccaata atttataaaa atggagatat tgttcgcttt
301 cacaggctga agattcaagt atataaaaag gagactcagg gtatcaccag ctctggcttt
361 gcatctttga cgtttgaggg aactttggga gcccctatca tacctcgcac ttcaagcaag
421 tattttaact tcactactga ggaccacaaa atggtagaag ccttacgtgt ttgggcatct
481 actcatatgt caccgtcttg gacattacta aaattgtgtg atgttcagcc aatgcagtat
541 tttgacctga cttgtcagct cttgggcaaa gcagaagtgg acggagcatc atttcttcta
601 aaggtatggg atggcaccag gacaccattt ccatcttgga gagtcttaat acaagacctt
661 gttcttgaag gtgatttaag tcacatccat cggctacaaa atctgacaat agacatttta
721 gtctacgata accatgttca tgtggcaaga tctctgaagg ttggaagctt tcttagaatc
781 tatagccttc ataccaaact tcaatcaatg aattcagaga atcagacaat gttaagttta
841 gagtttcatc ttcatggagg taccagttac ggtcggggaa tcagggtctt gccagaaagt
901 aactctgatg tggatcaact gaaaaaggat ttagaatctg caaatttgac agccaatcag
961 cattcagatg ttatctgtca atcagaacct gacgacagct ttccaagctc tggatcagta
1021 tcattatacg aggtagaaag atgtcaacag ctatctgcta caatacttac agatcatcag
1081 tatttggaga ggacaccact atgtgccatt ttgaaacaaa aagctcctca acaataccgc
1141 atccgagcaa aattgaggtc atataagccc agaagactat ttcagtctgt taaacttcat
1201 tgccctaaat gtcatttgct gcaagaagtt ccacatgagg gcgatttgga tataattttt
1261 caggatggtg caactaaaac cccagatgtc aagctacaaa atacatcatt atatgattca
1321 aaaatctgga ccactaaaaa tcaaaaagga cgaaaagtag cagttcattt tgtgaaaaat
1381 aatggtattc tcccgctttc aaatgaatgt ctacttttga tagaaggagg tacactcagt
1441 gaaatttgca aactctcgaa caagtttaat agtgtaattc ctgtgagatc tggccacgaa
1501 gacctggaac ttttggacct ttcagcacca tttcttatac aaggaacaat acatcactat
1561 ggatgtaaac agtgttctag tttgagatcc atacaaaatc taaattccct ggttgataaa
1621 acatcgtgga ttccttcttc tgtggcagaa gcactgggta ttgtacccct ccaatatgtg
1681 tttgttatga cctttacact tgatgatgga acaggagtac tagaagccta tctcatggat
1741 tctgacaaat tcttccagat tccagcatca gaagttctga tggatgatga ccttcagaaa
1801 agtgtggata tgatcatgga tatgttttgt cctccaggaa taaaaattga tgcatatccg
1861 tggttggaat gcttcatcaa gtcatacaat gtcacaaatg gaacagataa tcaaatttgc
1921 tatcagattt ttgacaccac agttgcagaa gatgtaatct aatattgcca tccaatttag
1981 catacataaa atgttgccac tcaaaaaaaa aaaaaaaaaa
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