LOCUS BC002917 1844 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens G protein-coupled receptor 172A, mRNA (cDNA clone
MGC:10628 IMAGE:3954480), complete cds.
ACCESSION BC002917
VERSION BC002917.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1844)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1844)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002917.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: c Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38146105.
FEATURES Location/Qualifiers
source 1..1844
/db_xref="H-InvDB:HIT000031287"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10628 IMAGE:3954480"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1844
/gene="GPR172A"
/gene_synonym="D15Ertd747e"
/gene_synonym="GPCR"
/gene_synonym="GPCR41"
/gene_synonym="PAR1"
/db_xref="GeneID:79581"
/db_xref="HGNC:HGNC:30224"
/db_xref="MIM:607882"
CDS 231..1568
/gene="GPR172A"
/gene_synonym="D15Ertd747e"
/gene_synonym="GPCR"
/gene_synonym="GPCR41"
/gene_synonym="PAR1"
/codon_start=1
/product="G protein-coupled receptor 172A"
/protein_id="AAH02917.1"
/db_xref="GeneID:79581"
/db_xref="HGNC:HGNC:30224"
/db_xref="MIM:607882"
/translation="MAAPTPARPVLTHLLVALFGMGSWAAVNGIWVELPVVVKELPEG
WSLPSYVSVLVALGNLGLLVVTLWRRLAPGKDEQVPIRVVQVLGMVGTALLASLWHHV
APVAGQLHSVAFLALAFVLALACCASNVTFLPFLSHLPPRFLRSFFLGQGLSALLPCV
LALVQGVGRLECPPAPINGTPGPPLDFLERFPASTFFWALTALLVASAAAFQGLLLLL
PPPPSVPTGELGSGLQVGAPGAEEEVEESSPLQEPPSQAAGTTPGPDPKAYQLLSARS
ACLLGLLAATNALTNGVLPAVQSFSCLPYGRLAYHLAVVLGSAANPLACFLAMGVLCR
SLAGLGGLSLLGVFCGGYLMALAVLSPCPPLVGTSAGVVLVVLSWVLCLGVFSYVKVA
ASSLLHGGGRPALLAAGVAIQVGSLLGAVAMFPPTSIYHVFHSRKDCADPCDS"
BASE COUNT 282 a 588 c 590 g 384 t
ORIGIN
1 gtccctgggc cggacggcgg tgtcccggcg tggcgggaag ccggcactgg agcgggagcg
61 cactgggcgc gggaccggga ggcgcaggga ccggacggct cccgagtcgc ccacctgacg
121 ctagaagaag tcttcacttc ccaggagagc caaagcgtgt ctggccctag gtgggaaaag
181 aactggctgt gacctttgcc ctgacctgga agggcccagc cttgggctga atggcagcac
241 ccacgcccgc ccgtccggtg ctgacccacc tgctggtggc tctcttcggc atgggctcct
301 gggctgcggt caatgggatc tgggtggagc tacctgtggt ggtcaaagag cttccagagg
361 gttggagcct cccctcttac gtctctgtgc ttgtggctct ggggaacctg ggtctgctgg
421 tggtgaccct ctggaggagg ctggccccag gaaaggacga gcaggtcccc atccgggtgg
481 tgcaggtgct gggcatggtg ggcacagccc tgctggcctc tctgtggcac catgtggccc
541 cagtggcagg acagttgcat tctgtggcct tcttagcact ggcctttgtg ctggcactgg
601 catgctgtgc ctcgaatgtc actttcctgc ccttcttgag ccacctgcca cctcgcttct
661 tacggtcatt cttcctgggt caaggcctga gtgccctgct gccctgcgtg ctggccctag
721 tgcagggtgt gggccgcctc gagtgcccgc cagcccccat caacggcacc cctggccccc
781 cgctcgactt ccttgagcgt tttcccgcca gcaccttctt ctgggcactg actgcccttc
841 tggtcgcttc agctgctgcc ttccagggtc ttctgctgct gttgccgcca ccaccatctg
901 tacccacagg ggagttagga tcaggcctcc aggtgggagc cccaggagca gaggaagagg
961 tggaagagtc ctcaccactg caagagccac caagccaggc agcaggcacc acccctggtc
1021 cagaccctaa ggcctatcag cttctatcag cccgcagtgc ctgcctgctg ggcctgttgg
1081 ccgccaccaa cgcgctgacc aatggcgtgc tgcctgccgt gcagagcttt tcctgcttac
1141 cctacgggcg tctggcctac cacctggctg tggtgctggg cagtgctgcc aatcccctgg
1201 cctgcttcct ggccatgggt gtgctgtgca ggtccttggc agggctgggc ggcctctctc
1261 tgctgggcgt gttctgtggg ggctacctga tggcgctggc agtcctgagc ccctgcccgc
1321 ccctggtggg cacctcggcg ggggtggtcc tcgtggtgct gtcgtgggtg ctgtgtcttg
1381 gcgtgttctc ctacgtgaag gtggcagcca gctccctgct gcatggcggg ggccggccgg
1441 cattgctggc agccggcgtg gccatccagg tgggctctct gctcggcgct gttgctatgt
1501 tccccccgac cagcatctat cacgtgttcc acagcagaaa ggactgtgca gacccctgtg
1561 actcctgagc ctgggcaggt ggggaccccg ctccccaaca cctgtctttc cctcaatgct
1621 gccaccatgc ctgagtgcct gcagcccagg aggcccgcac accggtacac tcgtggacac
1681 ctacacactc cataggagat cctggctttc cagggtgggc aagggcaagg agcaggcttg
1741 gagccaggga ccagtggggg ctgtagggta agcccctgag cctgggacct acatgtggtt
1801 tgcgtaataa aacatttgta tttaaaaaaa aaaaaaaaaa aaaa
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