LOCUS BC002900 858 bp mRNA linear HUM 11-DEC-2003
DEFINITION Homo sapiens proteasome (prosome, macropain) subunit, alpha type,
2, mRNA (cDNA clone IMAGE:3942625), partial cds.
ACCESSION BC002900
VERSION BC002900.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 858)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 858)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC002900.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: m Column: 13.
FEATURES Location/Qualifiers
source 1..858
/db_xref="H-InvDB:HIT000086180"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3942625"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..858
/gene="PSMA2"
/gene_synonym="HC3"
/gene_synonym="MU"
/gene_synonym="PMSA2"
/gene_synonym="PSC2"
/db_xref="GeneID:5683"
/db_xref="MIM:176842"
CDS <1..679
/gene="PSMA2"
/gene_synonym="HC3"
/gene_synonym="MU"
/gene_synonym="PMSA2"
/gene_synonym="PSC2"
/codon_start=2
/product="PSMA2 protein"
/protein_id="AAH02900.2"
/db_xref="GeneID:5683"
/db_xref="MIM:176842"
/translation="LTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQK
SILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLV
QRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVN
GKTFLEKRYNEDLELEDAIHTAILTLKESFEGQMTEDNIEVGICNEAGFRRLTPTEVK
DYLAAIA"
misc_feature 59..613
/gene="PSMA2"
/gene_synonym="HC3"
/gene_synonym="MU"
/gene_synonym="PMSA2"
/gene_synonym="PSC2"
/note="proteasome; Region: Proteasome A-type and B-type"
/db_xref="CDD:pfam00227"
BASE COUNT 282 a 151 c 184 g 241 t
ORIGIN
1 gctgactaca ttcagcccgt ctggtaaact tgtccagatt gaatatgctt tggctgctgt
61 agctggagga gccccgtccg tgggaattaa agctgcaaat ggtgtggtat tagcaactga
121 gaaaaaacag aaatccattc tgtatgatga gcgaagtgta cacaaagtag aaccaattac
181 caagcatata ggtttggtgt acagtggcat gggccccgat tacagagtgc ttgtgcacag
241 agctcgaaaa ctagctcaac aatactatct tgtgtaccaa gaacccattc ctacagctca
301 gctggtacag agagtagctt ctgtgatgca agaatatact cagtcaggtg gtgttcgtcc
361 atttggagtt tctttactta tttgtggttg gaatgaggga cgaccatatt tatttcagtc
421 agatccatct ggagcttact ttgcctggaa agctacagca atgggaaaga actatgtgaa
481 tgggaagact ttccttgaga aaagatataa tgaagatctg gaacttgaag atgccattca
541 tacagccatc ttaaccctaa aggaaagctt tgaagggcaa atgacagagg ataacataga
601 agttggaatc tgcaatgaag ctggatttag gaggcttact ccaactgaag ttaaggatta
661 cttggctgcc atagcataac aatgaagtga ctgaaaaatc cagaatttca gataatctat
721 ctacttaaac atgtttaaag tatgttttgt tttgcagact ttttgcatac ttatttctac
781 atggtttaaa tcgactgttt ttaaaatgac acttataaat cctaataaac tgttaaaccc
841 aaaaaaaaaa aaaaaaaa
//