LOCUS BC002882 2059 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens chromosome 16 open reading frame 5, mRNA (cDNA clone
MGC:10316 IMAGE:3941342), complete cds.
ACCESSION BC002882
VERSION BC002882.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2059)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2059)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002882.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: g Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7019336.
FEATURES Location/Qualifiers
source 1..2059
/db_xref="H-InvDB:HIT000031262"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10316 IMAGE:3941342"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2059
/gene="C16orf5"
/gene_synonym="CDIP"
/gene_synonym="I1"
/db_xref="GeneID:29965"
/db_xref="HGNC:HGNC:13234"
/db_xref="MIM:610503"
CDS 165..791
/gene="C16orf5"
/gene_synonym="CDIP"
/gene_synonym="I1"
/codon_start=1
/product="chromosome 16 open reading frame 5"
/protein_id="AAH02882.1"
/db_xref="GeneID:29965"
/db_xref="HGNC:HGNC:13234"
/db_xref="MIM:610503"
/translation="MSSEPPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPL
PPADIGPPPYEPPGHPMPQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPPGPYTP
GPYPGPGGHTATVLVPSGAATTVTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLM
NFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYIYTYKRLC"
BASE COUNT 371 a 655 c 569 g 464 t
ORIGIN
1 gccagctgcc gaggcgttcg gtcctgctgt tgcggccgct gccccagggc tgcggggacg
61 ctcccggagc cctgcctgtt ccctgtccat ccaggccagc agctgaagga gcctcacctg
121 cctcccttct ctgagtagca cggatttgag gagaagcagc gaagatgtcc agcgagcctc
181 cccctcctta tcctgggggc cccacagccc cacttctgga agagaaaagt ggagccccgc
241 ccaccccagg ccgttcctcc ccagctgtga tgcagccccc tccaggcatg ccactgcccc
301 ctgcggacat tggcccccca ccctatgagc cgccgggtca cccaatgccc cagcctggct
361 tcatcccacc acacatgagt gcagatggca cctacatgcc tccgggtttc taccctcctc
421 caggccccca cccacccatg ggctactacc ccccagggcc ctacacgcca gggccctacc
481 ctggccctgg gggccacaca gccacagtcc tggtcccttc aggagctgcc accacggtga
541 cagtgctgca gggagagatc tttgagggag cgcctgtgca gacggtgtgt ccccactgcc
601 agcaggccat caccaccaag atctcctacg agattggctt gatgaatttc gtgctgggtt
661 tcttctgttg cttcatggga tgtgatctgg gctgctgcct gatcccctgc ctcatcaatg
721 acttcaagga tgtgacgcac acatgcccca gctgcaaagc ctacatctac acgtacaagc
781 gcctgtgcta acggagctgg gactcgggac tcccccgcct gtcagtctgg ccccctgtgc
841 tttgctccct gtgctcagtg gtcactttcc cgctcccact tggggctggg agccgtgcca
901 ccatccccta gaagtcctgt cctcttcacc ctgccctacc tgagccgctg actcttctgg
961 caaaaattct gttgggattt aaggccaagg gtcagtgggt ggcagggggc tgacaatgag
1021 cttgtgtgtt gttggtctgc ttggtgtgtg tgatcgggaa gataagctgg gaggggtctc
1081 ctgctggggt cctgatgcct ctgtttccaa acaaggtaca ggttcagtcc agactctttc
1141 cccctgggac caacagcagc cagagcagtt agccagttag tccccaggcc tgtggccaca
1201 ggcgtttctg acctgctggg ccgagaatgg gtaagttgtc tggagtcagg tgggcccacg
1261 taggacaggg tcacaaagcc tgggtttgtt tctgggtact ttgcgcctct ggggtgctag
1321 aggtggggca tggtggctgg aagtaaaact gccaactctg gccctcagaa ctctcaggta
1381 tagaagccca ggatgtctaa taccctgtcc cagtgcccga gagctgcctg gtgtcaggta
1441 gagaggacac tgtacctggg tgaatgatca gaccctggta gctaagaagg aacttgtccc
1501 tttgagtcag tgtgcagacc ccctttcagg ccatgcctct gtgaaccctg tattgctggg
1561 gccggaagga gcccctgagc ctagcccctt cccgtctgcc ctgtgtcctc actgcgtgtg
1621 ggtatgacct ctgcctggtg gctggtgtat cccaactggg caagagatgg cagagggtcc
1681 cccttgtggg tgcgcttgga tgtgcagagc cttctccatg gattttcttc cctgtaagtg
1741 ccgggcccct caccccagct gacaggctgt tgctgtgcct gctcacacct gctcctgcag
1801 gcacactggg ctagggacga ggaaggagca gccacaagtg gtagaactgc cttggtggac
1861 accagcctcg ccctgtcttt atttcctgaa tggtttgtga acttgctcac ctggaccact
1921 gtatcctgcc actgtccttc ctggtctcgc actgccactg catggcctcc tgtcactgtg
1981 aatcgtggcc cagtctcagt ttgtagtttc tcattaaatt ggccctttca ctcccccgca
2041 aaaaaaaaaa aaaaaaaaa
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