LOCUS BC002799 3256 bp mRNA linear HUM 20-OCT-2005
DEFINITION Homo sapiens SAPS domain family, member 1, mRNA (cDNA clone
IMAGE:3634673), partial cds.
ACCESSION BC002799
VERSION BC002799.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3256)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3256)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 31, 2003 this sequence version replaced BC002799.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: b Column: 6.
FEATURES Location/Qualifiers
source 1..3256
/db_xref="H-InvDB:HIT000031194"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3634673"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..3256
/gene="SAPS1"
/gene_synonym="SAP190"
/db_xref="GeneID:22870"
/db_xref="HGNC:HGNC:29195"
/db_xref="IMGT/GENE-DB:29195"
/db_xref="MIM:29195"
CDS <1..2490
/gene="SAPS1"
/gene_synonym="SAP190"
/codon_start=1
/product="SAPS1 protein"
/protein_id="AAH02799.2"
/db_xref="GeneID:22870"
/db_xref="HGNC:HGNC:29195"
/db_xref="IMGT/GENE-DB:29195"
/db_xref="MIM:29195"
/translation="HLQAMVAWVTQEPPDSGEERLRYKYPSVACEILTSDVPQINDAL
GADESLLNRLYGFLQSTGSLNPLLASFFSKVMGILINRKTDQLVSFLRKKDDFVDLLL
QHIGTSAIMDLLLRLLTCVERPQLRQDVVNWLNEEKIVQRLIEQIHPSKDENQHSNAS
QSLCDIIRLSREQMIQVQDSPEPDQLLATLEKQETIEQLLSNMFEGEQSQSVIVSGIQ
VLLTLLEPRRPRSESVTVNSFFSSVDGQLELLAQGALESTVSSVGALHALRPRLSCFH
QLLLEPPKLEPLQMTWGMLAPPLGNTRLHVVKLLASALSANDAALTHELLALDVPNTM
LDLFFHYVFNNFLHAQVEGCVSTMLSLGPPPDSSPETPIQNPVVKHLLQQCRLVERIL
TSWEENDRVQCAGGPRKGYMGHLTRVAGALVQNTEKGPNAEQLRQLLKELPSEQQEQW
EAFVSGPLAETNKKNMVDLVNTHHLHSSSDDEDDRLKEFNFPEEAVLQQAFMDFQMQR
MTSAFIDHFGFNDEEFGEQEESVNAPFDKTANITFSLNADDENPNANLLEICYKDRIQ
QFDDDEEEEDEEEAQGSGESDGEDGAWQGSQLARGARLGQPPGVRSGGSTDSEDEEEE
DEEEEEDEEGIGCAARGGATPLSYPSPGPQPPGPSWTATFDPVPTDAPTSPRVSGEEE
LHTGPPAPQGPLSVPQGLPTQSLASPPARDALQLRSQDPTPPSAPQEATEGSKVTEPS
APCQALVSIGDLQATFHGIRSAPSSSDSATRDPSTSVPASGAHQPPQTTEGEKSPEPL
GLPQSQSAQALTPPPIPNGSAPEGPASPGSQ"
BASE COUNT 701 a 1030 c 972 g 553 t
ORIGIN
1 cacctgcaag caatggtggc ctgggtcacc caggagccgc cagatagcgg tgaggagcgg
61 ctgcgctaca agtaccccag tgtggcctgc gagattctga cctcagatgt gccccagatc
121 aatgatgccc tgggtgctga tgagtccctt ctgaaccggc tctacggctt cctgcagagc
181 accggcagcc tcaacccact gctggccagc ttcttcagca aggtcatggg catcctcatc
241 aaccgcaaga cagaccagct cgtgtccttt cttcggaaga aggatgactt cgtggacctg
301 ctgctgcagc acattggcac ctcggccatc atggacctcc tgctgcgcct gctcacctgt
361 gtggagcggc ctcagctgag gcaggatgtt gtcaattggc tcaacgagga gaagatcgtc
421 cagcggctga ttgagcagat ccacccgtcg aaggatgaga atcaacattc caacgcatcc
481 cagtccctgt gtgacatcat ccgcctgagc cgggagcaga tgatccaagt ccaggacagc
541 ccagagcctg accaactgct ggccaccctg gagaagcagg agacgattga gcagctctta
601 agcaacatgt tcgaggggga gcagagccag tctgtcatcg tcagtgggat ccaggtgctg
661 ctgaccctgc tggagcccag gaggccgagg tccgagtccg tgaccgtgaa cagcttcttc
721 agcagtgtgg atgggcagct ggagctcctg gcccaggggg ccctggaaag cactgtgtcc
781 agtgtgggcg ccttgcacgc cctacgcccg cggctcagct gcttccacca gctcctgctg
841 gagcctccca agctggagcc gctacagatg acatggggca tgctggctcc gcctctgggc
901 aacacgcggc tgcacgtggt caagctcctg gccagtgccc tgagcgccaa tgatgcagcc
961 ctgacgcacg agctcctggc actggacgtg cccaacacca tgctggacct cttcttccat
1021 tatgtcttca acaacttctt gcatgcccaa gtagagggat gcgtgagcac catgctgagc
1081 ttggggccac ctcctgacag cagccctgag acgcccatcc aaaaccctgt tgtgaaacat
1141 ctgctgcagc agtgccgcct ggtggagcgg atcctgacgt cctgggagga gaacgaccgt
1201 gtacagtgtg cgggaggccc tcggaaaggc tacatgggtc acctgacaag agtggccggt
1261 gccctggtgc agaacacgga gaaggggccc aatgcagagc agctgcggca gctgctgaag
1321 gagctgccca gcgagcagca ggagcagtgg gaagccttcg tatcggggcc cctggcggag
1381 accaacaaga agaacatggt ggacctggtg aacacccacc acctacactc ctccagtgac
1441 gatgaggacg accggctcaa ggagttcaac ttccctgagg aggctgtgct gcagcaggcc
1501 ttcatggact tccagatgca gcgcatgacc tctgccttca ttgaccactt cggcttcaat
1561 gatgaggagt ttggggagca ggaggagagt gtgaacgcac cttttgacaa gacagccaac
1621 atcaccttct ccctcaatgc tgacgatgag aaccccaacg ccaacctact tgagatatgc
1681 tacaaggacc gcatccagca gtttgatgat gatgaggaag aggaggacga ggaagaggcc
1741 cagggctcag gggagtctga tggagaagat ggcgcctggc agggcagcca gctggccagg
1801 ggggcccgtc tgggccagcc acctggtgtc cggagtggag gcagcacaga cagtgaggac
1861 gaagaagagg aggacgagga ggaggaggaa gacgaggagg gcattggctg tgcagcccgt
1921 ggaggggcca cccctctgtc ctaccccagc cctggccctc agcctccagg ccccagctgg
1981 acagccacct ttgacccagt gcctacagat gccccgacca gcccccgagt ctccggggag
2041 gaagagctgc acactgggcc tccagcccca caggggcccc tcagtgtgcc ccagggcctc
2101 cccactcaga gcctggccag ccctcctgcc cgtgacgccc tgcagctcag gtctcaggac
2161 cccacacccc cctcagcacc tcaggaagcc acagaaggca gcaaagtcac ggagccctca
2221 gccccttgcc aggccttggt tagcatcggg gaccttcagg ccaccttcca cgggatccgt
2281 tctgccccca gctcctcgga cagtgcaacc agagacccct ctacctctgt cccagcctcc
2341 ggggcccacc agccccccca gaccacagaa ggggagaaga gcccagagcc cttggggctt
2401 ccccaaagcc agagtgccca ggccctcacg cctcctccga tacccaatgg ctctgccccg
2461 gaagggcctg catccccagg ctcccaatag ctgcctggtg cggcagcggc ggccaaatct
2521 tccgtcctcc cgtggatctc ccggggtggg ggcagggcgg gtcccacgat ggcccccatt
2581 gccctcatca ccctgacacc cccacattct ctcctctgga cccccaggag gctggtgcca
2641 gggagacagg cccaacccac ccccatttgc actgagaaga gaagttttgg agcgttgcct
2701 cctagaataa agatacagag agtcaaatag agagaatgga gagagagaaa catatattat
2761 atattatata gagagaggga ggagagcgag agagagtgag gacaccgaac tgggctggcg
2821 gctccaaagc acagccttcc ctgttccgtc ccagcgggag ctggtgttag gggtcccaag
2881 gttgccaccc acgtgcccag ctgtcccacg ctgcagcgca gacggccacg cccacacccg
2941 gccttttagc tcaggtccac catgggggac ggcccagcgt gggtgggggt gccagagggt
3001 cccgagtggg ggccgtgcct ttgcccagac cctgcacttt caaccaggcc agtccggctc
3061 tggggagcag gggcctcccc ggcaacagcc ccaggggcct tgagggtctg aggtcccagc
3121 cctgttgcca agtgaccttg tccccagttc cctcctccca ggctggtgtg agtgtgcgtg
3181 cgtttgtgcc gagcttctat ttcatattgc aaatataaat aaaggaaggc agtttacgaa
3241 aaaaaaaaaa aaaaaa
//