LOCUS BC002789 577 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 16, mRNA (cDNA
clone IMAGE:3618066), partial cds.
ACCESSION BC002789
VERSION BC002789.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 577)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 577)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002789.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: j Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21237727.
FEATURES Location/Qualifiers
source 1..577
/db_xref="H-InvDB:HIT000086165_11"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3618066"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>577
/gene="DHX16"
/gene_synonym="DBP2"
/gene_synonym="DDX16"
/gene_synonym="PRP8"
/db_xref="GeneID:8449"
/db_xref="MIM:603405"
CDS 136..>577
/gene="DHX16"
/gene_synonym="DBP2"
/gene_synonym="DDX16"
/gene_synonym="PRP8"
/codon_start=1
/product="DHX16 protein"
/protein_id="AAH02789.1"
/db_xref="GeneID:8449"
/db_xref="MIM:603405"
/translation="MATPAGLERWVQDELHSVLGLSERHVAQFLIGTAQRCTSAEEFV
QRLRDTDTLDLSGPARDFALRLWNKVPRKAVVEKPARAAEREARALLEKNRSYRLLED
SEESSEETVSRAGSSLQKKRKKRKHLRKKREEEEEEEASEKKKKK"
BASE COUNT 150 a 144 c 201 g 82 t
ORIGIN
1 gaagatccta gaggtcccaa ggtagctgac ttgcgaagct gaggctccag ccgagggctc
61 caggcctctg accggcccag cagtgagcgc ggctgcccga cgcttcaggg ccgggagcag
121 ggagcgtgag tcgccatggc gacgccggcg ggtctggagc gctgggttca ggacgagctg
181 cactcggtgt tggggctgag cgagcggcac gtcgcccagt ttctgatcgg taccgcacag
241 cgctgcacct ctgccgagga gttcgtgcag cgcctacgag acactgatac cttggatctc
301 agtgggccgg cccgggactt cgccctgaga ctctggaaca aggtaccacg aaaggcagtg
361 gtagaaaagc cagctcgggc agcagagcga gaggcccggg ccctgctgga gaagaaccga
421 tcttataggt tactggaaga cagtgaagag agcagtgagg agactgtgag tagggctgga
481 agcagcctcc agaagaaacg taaaaagcgg aaacacctca ggaagaagcg tgaggaagaa
541 gaggaggaag aggcttctga aaaaaaaaaa aaaaaaa
//