LOCUS BC002764 2211 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Wolf-Hirschhorn syndrome candidate 2, mRNA (cDNA clone
MGC:3567 IMAGE:3630594), complete cds.
ACCESSION BC002764
VERSION BC002764.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2211)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2211)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 31, 2003 this sequence version replaced BC002764.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: o Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19913362.
FEATURES Location/Qualifiers
source 1..2211
/db_xref="H-InvDB:HIT000031166"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3567 IMAGE:3630594"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2211
/gene="WHSC2"
/gene_synonym="FLJ10442"
/gene_synonym="FLJ25112"
/gene_synonym="NELF-A"
/gene_synonym="NELFA"
/gene_synonym="P/OKcl.15"
/db_xref="GeneID:7469"
/db_xref="HGNC:HGNC:12768"
/db_xref="MIM:606026"
CDS 17..1603
/gene="WHSC2"
/gene_synonym="FLJ10442"
/gene_synonym="FLJ25112"
/gene_synonym="NELF-A"
/gene_synonym="NELFA"
/gene_synonym="P/OKcl.15"
/codon_start=1
/product="Wolf-Hirschhorn syndrome candidate 2"
/protein_id="AAH02764.2"
/db_xref="GeneID:7469"
/db_xref="HGNC:HGNC:12768"
/db_xref="MIM:606026"
/translation="MASMRESDTGLWLHNKLGATDELWAPPSIASLLTAAVIDNIRLC
FHGLSSAVKLKLLLGTLHLPRRTVDEMKGALMEIIQLASLDSDPWVLMVADILKSFPD
TGSLNLELEEQNPNVQDILGELREKVGECEASAMLPLECQYLNKNALTTLAGPLTPPV
KHFQLKRKPKSATLRAELLQKSTETAQQLKRSAGVPFHAKGRGLLRKMDTTTPLKGIP
KQAPFRSPTAPSVFSPTGNRTPIPPSRTLLRKERGVKLLDISELDMVGAGREAKRRRK
TLDAEVVEKPAKEETVVENATPDYAAGLVSTQKLGSLNNEPALPSTSYLPSTPSVVPA
SSYIPSSETPPAPSSREASRPPEEPSAPSPTLPAQFKQRAPMYNSGLSPATPTPAAPT
SPLTPTTPPAVAPTTQTPPVAMVAPQTQAPAQQQPKKNLSLTREQMFAAQEMFKTANK
VTRPEKALILGFMAGSRENPCQEQGDVIQIKLSEHTEDLPKADGQGSTTMLVDTVFEM
NYATGQWTRFKKYKPMTNVS"
BASE COUNT 480 a 692 c 621 g 418 t
ORIGIN
1 cgcgctttcc cccaagatgg cgtccatgcg ggagagcgac acgggcctgt ggctgcacaa
61 caagctgggg gccacggacg agctgtgggc gccgcccagc atcgcgtccc tgctcacggc
121 cgcggtcatc gacaacatcc gtctctgctt ccatggcctc tcgtcggcag tgaagctcaa
181 gttgctactc gggacgctgc acctcccgcg ccgcacggtg gacgagatga agggcgccct
241 aatggagatc atccagctcg ccagcctcga ctcggacccc tgggtgctca tggtcgccga
301 catcttgaag tcctttccgg acacaggctc gcttaacctg gagctggagg agcagaatcc
361 caacgttcag gatattttgg gagaacttag agaaaaggtg ggtgagtgtg aagcgtctgc
421 catgctgcca ctggagtgcc agtacttgaa caaaaacgcc ctgacgaccc tcgcgggacc
481 cctcactccc ccggtgaagc attttcagtt aaagcggaaa cccaagagcg ccacgctgcg
541 ggcggagctg ctgcagaagt ccacggagac cgcccagcag ttgaagcgga gcgccggggt
601 gcccttccac gccaagggcc gggggctgct gcggaagatg gacaccacca ccccactcaa
661 aggcatcccg aagcaggcgc ccttcagaag ccccacggcg cccagcgtct tcagccccac
721 agggaaccgg acccccatcc cgccttccag gacgctgctg cggaaggaac gaggtgtgaa
781 gctgctggac atctctgagc tggatatggt tggcgctggc cgagaggcga agcggagaag
841 gaagactctc gatgcggagg tggtggagaa gccggccaag gaggaaacgg tggtggagaa
901 cgccaccccg gactacgcag ccggcctggt gtccacgcag aaacttgggt ccctgaacaa
961 tgagcctgcg ctgccctcca cgagctacct tccctccacg cccagcgtgg ttcccgcctc
1021 ctcctacatc cccagctccg agacaccccc agccccatct tcccgggaag ccagccgccc
1081 accagaggag cccagcgccc cgagccccac gttgccagcg cagttcaagc agcgggcgcc
1141 catgtacaac agcggcctga gccctgccac acccacgcct gcggcgccca cctcgcctct
1201 gacacccacc acacctccgg ctgtcgcccc taccactcag acacccccgg ttgccatggt
1261 ggccccgcag acccaggccc ctgctcagca gcagcctaag aagaacctgt ccctcacgag
1321 agagcagatg ttcgctgccc aggagatgtt caagacggcc aacaaagtca cgcggcccga
1381 gaaggccctc atcctgggct tcatggccgg ctcccgagag aacccgtgcc aggagcaggg
1441 ggacgtgatc cagatcaagc tgagcgagca cacggaggac ctgcccaagg cggacggcca
1501 gggtagcaca accatgctgg tggacacagt gtttgagatg aactatgcca cgggccagtg
1561 gacgcgcttc aagaagtaca agcccatgac caatgtgtcc tagaaccacc tgcctcacag
1621 ctggccgtca cttgtggggg tccacgggac gatggctttg ccagcttaaa gtaaccggat
1681 ggcggacacc tggcccccga ggtcccccgg ccgccgccct gctgctgacc cagcctgttt
1741 taagttctgg atgcatttct ctggggtatt tggggcttat ttttaaaatt ttaatatggg
1801 ttcttttttg tgtgatttaa gacacttttt ggactcaacg ttacattttt gaatgtagta
1861 agtaaattaa ccaaaaaagt tacaacttcc taattttagt gacagctctg cctgttagac
1921 tcttactttt taaaatcttt tctattttcc ctcgctgggg cagtgccctc ctacccccag
1981 ggttgagggg accaaggtgg cacggtggta ctgggggtgc ggcagggaca cccgaccaca
2041 ccagagcgtg ggagacggtg ggccttgtcc cctgcctgtg cctgcctggg agttttgtat
2101 tcatcttttg tatagttgtg gacatttaag acagtctttg ggtacctatt ttcattgtaa
2161 aactatctga accattaaag tcgagctttt ctaaaaaaaa aaaaaaaaaa a
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