LOCUS BC002707 1625 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens spondin 2, extracellular matrix protein, mRNA (cDNA
clone MGC:3472 IMAGE:3630467), complete cds.
ACCESSION BC002707
VERSION BC002707.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1625)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1625)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002707.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: a Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6912681.
FEATURES Location/Qualifiers
source 1..1625
/db_xref="H-InvDB:HIT000031116"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3472 IMAGE:3630467"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1625
/gene="SPON2"
/gene_synonym="DIL-1"
/gene_synonym="DIL1"
/gene_synonym="M-spondin"
/gene_synonym="Mindin"
/db_xref="GeneID:10417"
/db_xref="HGNC:HGNC:11253"
/db_xref="MIM:605918"
CDS 60..1055
/gene="SPON2"
/gene_synonym="DIL-1"
/gene_synonym="DIL1"
/gene_synonym="M-spondin"
/gene_synonym="Mindin"
/codon_start=1
/product="spondin 2, extracellular matrix protein"
/protein_id="AAH02707.1"
/db_xref="GeneID:10417"
/db_xref="HGNC:HGNC:11253"
/db_xref="MIM:605918"
/translation="MENPSPAAALGKALCALLLATLGAAGQPLGGESICSARAPAKYS
ITFTGKWSQTAFPKQYPLFRPPAQWSSLLGAAHSSDYSMWRKNQYVSNGLRDFAERGE
AWALMKEIEAAGEALQSVHEVFSAPAVPSGTGQTSAELEVQRRHSLVSFVVRIVPSPD
WFVGVDSLDLCDGDRWREQAALDLYPYDAGTDSGFTFSSPNFATIPQDTVTEITSSSP
SHPANSFYYPRLKALPPIARVTLLRLRQSPRAFIPPAPVLPSRDNEIVDSASVPETPL
DCEVSLWSSWGLCGGHCGRLGTKSRTRYVRVQPANNGSPCPELEEEAECVPDNCV"
BASE COUNT 291 a 548 c 496 g 290 t
ORIGIN
1 ccgggctctg gctgggaccc gaccgctgcc ggccgcgctc ccgctgctcc tgccgggtga
61 tggaaaaccc cagcccggcc gccgccctgg gcaaggccct ctgcgctctc ctcctggcca
121 ctctcggcgc cgccggccag cctcttgggg gagagtccat ctgttccgcc agagccccgg
181 ccaaatacag catcaccttc acgggcaagt ggagccagac ggccttcccc aagcagtacc
241 ccctgttccg cccccctgcg cagtggtctt cgctgctggg ggccgcgcat agctccgact
301 acagcatgtg gaggaagaac cagtacgtca gtaacgggct gcgcgacttt gcggagcgcg
361 gcgaggcctg ggcgctgatg aaggagatcg aggcggcggg ggaggcgctg cagagcgtgc
421 acgaggtgtt ttcggcgccc gccgtcccca gcggcaccgg gcagacgtcg gcggagctgg
481 aggtgcagcg caggcactcg ctggtctcgt ttgtggtgcg catcgtgccc agccccgact
541 ggttcgtggg cgtggacagc ctggacctgt gcgacgggga ccgttggcgg gaacaggcgg
601 cgctggacct gtacccctac gacgccggga cggacagcgg cttcaccttc tcctccccca
661 acttcgccac catcccgcag gacacggtga ccgagataac gtcctcctct cccagccacc
721 cggccaactc cttctactac ccgcggctga aggccctgcc tcccatcgcc agggtgacac
781 tgctgcggct gcgacagagc cccagggcct tcatccctcc cgccccagtc ctgcccagca
841 gggacaatga gattgtagac agcgcctcag ttccagaaac gccgctggac tgcgaggtct
901 ccctgtggtc gtcctgggga ctgtgcggag gccactgtgg gaggctcggg accaagagca
961 ggactcgcta cgtccgggtc cagcccgcca acaacgggag cccctgcccc gagctcgaag
1021 aagaggctga gtgcgtccct gataactgcg tctaagacca gagccccgca gcccctgggg
1081 ccccccggag ccatggggtg tcgggggctc ctgtgcaggc tcatgctgca ggcggccgag
1141 ggcacagggg gtttcgcgct gctcctgacc gcggtgaggc cgcgccgacc atctctgcac
1201 tgaagggccc tctggtggcc ggcacgggca ttgggaaaca gcctcctcct ttcccaacct
1261 tgcttcttag gggcccccgt gtcccgtctg ctctcagcct cctcctcctg caggataaag
1321 tcatccccaa ggctccagct actctaaatt atgtctcctt ataagttatt gctgctccag
1381 gagattgtcc ttcatcgtcc aggggcctgg ctcccacgtg gttgcagata cctcagacct
1441 ggtgctctag gctgtgctga gcccactctc ccgagggcgc atccaagcgg gggccacttg
1501 agaagtgaat aaatggggcg gtttcggaag cgtcagtgtt tccatgttat ggatctctct
1561 gcgtttgaat aaagactatc tctgttgctc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1621 aaaaa
//