LOCUS BC002705 1388 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens rhomboid domain containing 3, mRNA (cDNA clone MGC:3580 IMAGE:3627843), complete cds. ACCESSION BC002705 VERSION BC002705.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1388) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1388) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Oct 31, 2003 this sequence version replaced BC002705.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 12 Row: a Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 11072100. FEATURES Location/Qualifiers source 1..1388 /db_xref="H-InvDB:HIT000031114" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:3580 IMAGE:3627843" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1388 /gene="RHBDD3" /gene_synonym="HS984G1A" /gene_synonym="PTAG" /db_xref="GeneID:25807" /db_xref="HGNC:HGNC:1308" CDS 24..1184 /gene="RHBDD3" /gene_synonym="HS984G1A" /gene_synonym="PTAG" /codon_start=1 /product="rhomboid domain containing 3" /protein_id="AAH02705.1" /db_xref="GeneID:25807" /db_xref="HGNC:HGNC:1308" /translation="MHARGPHGQLSPALPLASSVLMLLMSTLWLVGAGPGLVLAPELL LDPWQVHRLLTHALGHTALPGLLLSLLLLPTVGWQQECHLGTLRFLHASALLALASGL LAVLLAGLGLSSAAGSCGYMPVHLAMLAGEGHRPRRPRGALPPWLSPWLLLALTPLLS SEPPFLQLLCGLLAGLAYAAGAFRWLEPSERRLQVLQEGVLCRTLAGCWPLRLLATPG SLAELPVTHPAGVRPPIPGPPYVASPDLWSHWEDSALPPPSLRPVQPTWEGSSEAGLD WAGASFSPGTPMWAALDEQMLQEGIQASLLDGPAQEPQSAPWLSKSSVSSLRLQQLER MGFPTEQAVVALAATGRVEGAVSLLVGGQVGTETLVTHGKGGPAHSEGPGPP" BASE COUNT 209 a 465 c 455 g 259 t ORIGIN 1 ccttgaccgt cctcaaccaa gcgatgcatg ccaggggccc ccatggccaa ctgtccccag 61 cactgcctct ggcctcctca gtcctgatgc tgctgatgag caccctgtgg ctggtggggg 121 ccggccccgg cctggtcctg gccccggagc tgttgctgga cccctggcag gtgcaccggc 181 tgctgaccca tgccctgggc cacacggccc tgccaggcct gctcctgagc ctgctgctcc 241 tgcccactgt gggctggcag caggagtgcc acctgggcac gctgagattc ctgcatgcct 301 cagccctgct cgccctggct tctgggctgc tggcagtgct gctggcaggc cttgggctgt 361 ccagtgcagc cggcagctgt ggatacatgc ctgtccacct ggccatgctg gctggggagg 421 gacaccgccc tagacggccc cgtggggcac tgccaccgtg gctgtcgccg tggctgctgc 481 ttgccctgac cccactgctc agctctgagc cacccttcct gcagctcctt tgcggcctcc 541 ttgccggcct ggcctatgca gctggggcct tccggtggct ggaaccctca gagcgacggc 601 tgcaggtgct gcaggagggc gtcttgtgca ggaccttggc ggggtgctgg cccctgaggc 661 tccttgccac cccgggtagc ctggcggagc tgcctgtcac ccatcctgcc ggagtgaggc 721 ctcccatccc tggaccgcct tatgtggcct cccctgacct ctggtcccac tgggaagact 781 cagccctgcc cccaccaagc ctgaggcctg tgcagcccac ctgggagggc tcctcagagg 841 caggcctgga ctgggctggg gccagcttct ccccagggac tccgatgtgg gcggccttgg 901 atgagcagat gctgcaggag ggcatccagg cctcgcttct tgacgggcca gcccaggaac 961 cccagagcgc accatggctg tccaagtcct ctgtctcctc tctgcggctg cagcagctgg 1021 agcgcatggg cttccctacg gagcaggcgg tggtggcact ggcagccaca ggccgtgtgg 1081 agggtgccgt gtcactgttg gttggaggac aagtgggcac tgagaccctg gtgacccatg 1141 gaaagggtgg gcctgcccac tccgagggtc ctgggcctcc ctagcccagg cagagagtgg 1201 ggcacaggca ggcccttggg tgctaagggc tgggctgcat gtgggtagcc cgagctccta 1261 ctctgtctaa agagggccac agtggggagc aggggcacct ctggaggcag gagaggcccc 1321 ccagcatgct gccctagtac gtgtttagaa taaaaaccag tttgtttttc aaaaaaaaaa 1381 aaaaaaaa //