LOCUS BC002691 2094 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens armadillo repeat containing, X-linked 1, mRNA (cDNA
clone MGC:3387 IMAGE:3605690), complete cds.
ACCESSION BC002691
VERSION BC002691.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2094)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2094)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002691.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: o Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7706142.
FEATURES Location/Qualifiers
source 1..2094
/db_xref="H-InvDB:HIT000031102"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3387 IMAGE:3605690"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2094
/gene="ARMCX1"
/gene_synonym="ALEX1"
/db_xref="GeneID:51309"
/db_xref="HGNC:HGNC:18073"
/db_xref="MIM:300362"
CDS 311..1672
/gene="ARMCX1"
/gene_synonym="ALEX1"
/codon_start=1
/product="armadillo repeat containing, X-linked 1"
/protein_id="AAH02691.1"
/db_xref="GeneID:51309"
/db_xref="HGNC:HGNC:18073"
/db_xref="MIM:300362"
/translation="MGRTREAGCVAAGVVIGAGACYCVYRLAWGRDENEKIWDEDEES
TDTSEIGVETVKGAKTNAGAGSGAKLQGDSEVKPEVSLGLEDCPGVKEKAHSGSHSGG
GLEAKAKALFNTLKEQASAKAGKGARVGTISGNRTLAPSLPCPGGRGGGCHPTRSGSR
AGGRASGKSKGKARSKSTRAPATTWPVRRGKFNFPYKIDDILSAPDLQKVLNILERTN
DPFIQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKTKDPIIREKTYNALNNLSV
NAENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVTNHYQHLLSYSFPDFFA
LLFLGNHFTKIQIMKLIINFTENPAMTRELVSCKVPSELISLFNKEWDREILLNILTL
FENINDNIKNEGLASSRKEFSRSSLFFLFKESGVCVKKIKALANHNDLVVKVKVLKVL
TKL"
BASE COUNT 620 a 412 c 526 g 536 t
ORIGIN
1 atagcccaga gggcgagagg gcctgtggcc tgggggaagg aggacgaggt tctgcctgga
61 tcccagcagt aggacgctgt gccatttggg aacaaaggaa tagtctgcct ggaatccctg
121 cagatcttgg ggccggaggc cagtccaacc cttggagcag gaagaaacgc aaagttgtca
181 agaaccaagt cgagctgcct cagagccggc ccgcagtagc tgcagactcc gcccgcgacg
241 tgtgcgcgct tctctgggcc agagcgagcc tgttttgtgc tcgggttaag agatttgtcc
301 cagctatacc atgggccgca ctcgggaagc tggctgcgtg gccgctggtg tggttatcgg
361 ggctggtgcc tgctactgtg tatacagact ggcttgggga agagacgaga acgagaaaat
421 ctgggacgaa gacgaggagt ctacggacac ctcagagatt ggggttgaga ctgtgaaagg
481 agctaaaact aacgctgggg cagggtctgg ggccaaactt cagggtgatt cagaggtcaa
541 gcctgaggtg agtttgggac tcgaggattg tccgggtgta aaagagaagg cccattcagg
601 atcccacagc ggaggtggcc tagaggccaa ggccaaggcc cttttcaaca cgctgaagga
661 acaggcaagt gcaaaggcag gcaaaggggc tagggtgggt accatctctg ggaacaggac
721 ccttgcaccg agtttaccct gcccaggagg caggggtgga ggctgccacc ccaccaggag
781 tggatctagg gccgggggca gggcaagtgg aaaatccaag ggaaaggccc gaagtaagag
841 caccagggct ccagctacaa catggcctgt ccggagaggc aagttcaact ttccttataa
901 aattgatgat attctgagtg ctcccgacct ccaaaaggtc ctcaacatcc tggagcgaac
961 aaatgatcct tttattcaag aagtagcctt ggtcactctg ggtaacaatg cagcatattc
1021 atttaaccag aatgccatac gtgaattggg tggtgtccca attattgcaa aactgataaa
1081 aacaaaagac cccataatta gggaaaagac ttacaatgcc cttaataact tgagtgtgaa
1141 cgcagaaaat cagggcaaga ttaagacgta catcagtcaa gtgtgtgatg acaccatggt
1201 ctgtcgcttg gactcagctg tgcagatggc tgggctaaga ctgttaacca acatgactgt
1261 gactaatcat taccaacatt tgctttccta ttcttttcca gacttttttg ctttgttatt
1321 cctgggaaat cacttcacca agatacagat tatgaaacta attataaact ttactgaaaa
1381 tccagccatg acaagagagc tggtcagttg taaagtacca tcagaattga tttccctctt
1441 taataaagaa tgggatagag agattcttct taatatcctt accctatttg agaatataaa
1501 tgacaacata aaaaatgaag ggctcgcatc atccaggaaa gaattcagca gaagttcact
1561 ttttttctta ttcaaagagt ctggagtttg tgttaagaaa atcaaagcac tagcaaatca
1621 caatgatctg gtggtgaaag taaaagtcct gaaagtatta accaaactct aatttggagt
1681 ctgtcccaaa caatattgag atatttgcag ttggtacgat gtgatttgta aattctttgt
1741 ttttcattgt gcgtatatgg taaagagatc ttttcagctg ctattttgga ataatgacta
1801 tcatatatca taacagtgac tgatgttggt tgtaatggtt gggtttagga tgaaccattt
1861 taaggatgcc aaatgaaata ttagtatttg tacacagaaa gaatttattg atttgatctt
1921 attacctaga ttgagatttt ttaatctttc ctctacctaa actgacaatg aattggttat
1981 acatcatgca taagctacac ttttatatta gtttatattt gttattctaa gacttgtgtt
2041 tcatcaataa agttgtgttt taagcagcag aaaaaaaaaa aaaaaaaaaa aaaa
//