LOCUS BC002688 945 bp mRNA linear HUM 25-AUG-2005 DEFINITION Homo sapiens SHANK-associated RH domain interactor, mRNA (cDNA clone IMAGE:3609095), partial cds. ACCESSION BC002688 VERSION BC002688.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 945) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 945) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Nov 6, 2003 this sequence version replaced BC002688.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 12 Row: m Column: 13. FEATURES Location/Qualifiers source 1..945 /db_xref="H-InvDB:HIT000086154" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3609095" /tissue_type="Uterus, endometrium adenocarcinoma" /clone_lib="NIH_MGC_44" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..945 /gene="SHARPIN" /gene_synonym="DKFZP434N1923" /gene_synonym="SIPL1" /db_xref="GeneID:81858" CDS <1..722 /gene="SHARPIN" /gene_synonym="DKFZP434N1923" /gene_synonym="SIPL1" /codon_start=3 /product="SHARPIN protein" /protein_id="AAH02688.2" /db_xref="GeneID:81858" /translation="EASTLKGPPPEADLPRSPGNLTEREELAGSLARAIAGGDEKGAA QVAAVLAQHRVALSVQLQEACFPPGPIRLQVTLEDAASAASAASSPHVALQVHPHCTV AALQEQAFSELGFPPAVQRWVIGRCLCVPERSLASYGVRQDGDPAFLYLLSAPREAPA TGPSPQHPQKMDGELGRLFPPSLGLPPGPQPAASSLPSPLQPSWSCPSCTFINAPDRP GCEMCSTQRPCTWDPLAAAST" BASE COUNT 225 a 311 c 246 g 163 t ORIGIN 1 cggaagcctc cacactcaag ggccctccac ctgaggcaga tcttcctagg agccctggaa 61 acttgacgga gagagaagag ctggcaggga gcctggcccg ggctattgca ggtggagacg 121 agaagggggc agcccaagtg gcagccgtcc tggcccagca tcgtgtggcc ctgagtgttc 181 agcttcagga ggcctgcttc ccacctggcc ccatcaggct gcaggtcaca cttgaagacg 241 ctgcctctgc cgcatccgcc gcgtcctctc cacacgttgc cctgcaggtc cacccccact 301 gcactgttgc agctctccag gagcaggcgt tctcagagct cggtttcccg ccagccgtgc 361 aacgctgggt catcggacgg tgcctgtgtg tgcctgagcg cagccttgcc tcttacgggg 421 ttcggcagga tggggaccct gctttcctct acttgctgtc agctcctcga gaagccccag 481 ccacaggacc tagccctcag cacccccaga agatggacgg ggaacttgga cgcttgtttc 541 ccccatcatt ggggctaccc ccaggccccc agccagctgc ctccagcctg cccagtccac 601 tccagcccag ctggtcctgt ccttcctgca ccttcatcaa tgccccagac cgccctggct 661 gtgagatgtg tagcacccag aggccctgca cttgggaccc ccttgctgca gcttccacct 721 agcagccacc agaggttaca aggggagagt ggcccttccc tcacaagtcc gacatctcca 781 ggcccccact gaactccggg gacctctact gactgcttgc tgggacagtc accagggttg 841 gggggaaggg ccacaaaatg aaaccattaa agacccttaa gagccaaaaa aaaaaaaaaa 901 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa //