LOCUS BC002678 1006 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens peptidylprolyl isomerase C (cyclophilin C), mRNA (cDNA
clone MGC:3673 IMAGE:3610178), complete cds.
ACCESSION BC002678
VERSION BC002678.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1006)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1006)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC002678.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: k Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45439319.
FEATURES Location/Qualifiers
source 1..1006
/db_xref="H-InvDB:HIT000031090"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3673 IMAGE:3610178"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1006
/gene="PPIC"
/gene_synonym="CYPC"
/gene_synonym="MGC3673"
/db_xref="GeneID:5480"
/db_xref="HGNC:HGNC:9256"
/db_xref="MIM:123842"
CDS 79..717
/gene="PPIC"
/gene_synonym="CYPC"
/gene_synonym="MGC3673"
/codon_start=1
/product="peptidylprolyl isomerase C (cyclophilin C)"
/protein_id="AAH02678.1"
/db_xref="GeneID:5480"
/db_xref="HGNC:HGNC:9256"
/db_xref="MIM:123842"
/translation="MGPGPRLLLPLVLCVGLGALVFSSGAEGFRKRGPSVTAKVFFDV
RIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYGYKGSKFHRVIKDFMIQGGDIT
TGDGTGGVSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKH
VVFGKVIDGMTVVHSIELQATDGHDRPLTNCSIINSGKIDVKTPFVVEIADW"
BASE COUNT 248 a 218 c 266 g 274 t
ORIGIN
1 cccgtcagct gtcccagagc ctgtgtcgcg cccgtgccgg tagcgcccgt gccggtagcg
61 ccgctgccac cgctcaccat gggcccgggt cctcggctgc tgctacctct cgtgctttgc
121 gtggggctcg gcgcacttgt gttttcttcg ggggccgagg gcttccgcaa gcgaggcccc
181 tcggtgacgg ccaaggtctt ctttgatgtg aggattggag acaaagatgt tggcagaatt
241 gtgattggcc tctttggaaa agttgtgccc aagacagtgg aaaattttgt tgctctagca
301 acaggagaga aaggatatgg atataaagga agcaagtttc atcgtgtcat caaggatttc
361 atgattcaag gaggtgacat caccactgga gatggcactg ggggtgtgag catctatggt
421 gagacatttc cagatgagaa cttcaagctg aagcactatg gcattgggtg ggtcagcatg
481 gccaacgctg ggcctgacac caatggctct cagttcttta tcaccttgac caagcccacc
541 tggttggacg gcaaacatgt ggtgtttgga aaagtcattg atgggatgac agtggtgcac
601 tccatagagc tccaagcaac tgatgggcat gaccgtccac tcaccaactg ctcgatcatc
661 aacagtggca agatagacgt gaaaacgcct tttgtggttg agatcgctga ttggtgacac
721 aactggcaga aaacaaggat atgctttggc aggggtgtgt gtgtgtgtgt gtgtgtgtgt
781 gtgttgtgtt gtctttcaat tatttgcttt ttttttttac tttctttttg tattctatcc
841 cagatcacag gaaagttata aaaatcaaac cgtcaccctt tagtttgctt gaactttagt
901 aaaccacctg cttagggact ttgaacttaa atatatcccc ttcctcaagt ggtgctattt
961 taaaactaaa aaaaactttg aattggcaaa aaaaaaaaaa aaaaaa
//