LOCUS BC002674 1855 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 49, mRNA (cDNA
clone MGC:3425 IMAGE:3607922), complete cds.
ACCESSION BC002674
VERSION BC002674.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1855)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1855)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002674.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: k Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222345.
FEATURES Location/Qualifiers
source 1..1855
/db_xref="H-InvDB:HIT000031086"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3425 IMAGE:3607922"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1855
/gene="DDX49"
/gene_synonym="FLJ10432"
/gene_synonym="R27090_2"
/db_xref="GeneID:54555"
/db_xref="HGNC:HGNC:18684"
CDS 58..1509
/gene="DDX49"
/gene_synonym="FLJ10432"
/gene_synonym="R27090_2"
/codon_start=1
/product="DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
/protein_id="AAH02674.1"
/db_xref="GeneID:54555"
/db_xref="HGNC:HGNC:18684"
/translation="MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLG
CAKTGSGKTAAFVLPILQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDC
IIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQ
GCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQ
LDQRYLLVPEKVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTV
ALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIH
RVGRTARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVR
RECEIKLEAAHFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNRRFKEKVEET
LKRQKAGRAGHKGRPPRTPSGSHSGPVPSQGLV"
BASE COUNT 426 a 570 c 556 g 303 t
ORIGIN
1 gccggaagcg cggatcacac gggcccctac aaggggcccc tacaagcggc cacaaggatg
61 gcaggcttcg cggagctcgg gctgtcatcg tggctcgtgg aacaatgtcg gcagctgggt
121 ttgaagcagc ccacgcccgt gcagctcggc tgcatccccg ccatcctgga gggtcgagac
181 tgcttgggct gtgctaagac aggcagtggg aagacagcag cgtttgtcct tcccatcttg
241 cagaagctgt ctgaggatcc ctatggcatc ttctgcctcg tcctgacacc caccagggag
301 ctggcctacc agatcgcaga gcagttccgg gtcctgggga agcctctagg gctgaaagac
361 tgcatcatcg tcggtggcat ggacatggtg gcccaggcgc tggagctctc tcggaaacca
421 cacgtggtca tcgccacgcc ggggcgcctg gcagatcacc tgcgcagctc caacactttt
481 agtataaaga agatccgctt cctggtgatg gatgaggcag accggctgct ggaacagggc
541 tgcactgact tcaccgtgga cctggaggcc atcctggcgg ctgtgccggc ccgcaggcag
601 acactgctgt tcagcgccac gctgaccgac acactccggg agctgcaggg tctggccacc
661 aaccagccct tcttctggga agcacaggcc ccggtgagca ccgtggagca gctggaccag
721 cgctacctgc tggtgcctga gaaggtcaag gacgcctacc tggtccacct gatccagcgc
781 ttccaggatg agcacgagga ctggtccatt atcatcttca ccaacacgtg caagacctgc
841 cagattctgt gcatgatgct gcgcaaattc agcttcccca ccgtggctct gcactccatg
901 atgaagcaga aagaacgctt tgccgcccta gccaagttca agtccagcat ctaccggatc
961 ctgatcgcaa cagacgtggc ctcccggggc ctggacatcc ctacggtaca ggtggtcatc
1021 aaccacaaca cccccgggct ccccaagatc tacatccacc gagtcggccg gacggcccgt
1081 gcagggcggc agggtcaggc catcacgctg gtgacacagt acgacatcca cctggtgcac
1141 gccatcgagg agcagatcaa gaagaagctg gaggagttct ccgtggaaga ggccgaggtg
1201 ctacagatcc tcacacaggt caacgtggtg cgaagagagt gtgagatcaa actggaggcg
1261 gcccactttg acgaaaagaa ggagatcaac aaacggaagc agctgatcct ggaggggaag
1321 gaccctgacc tggaggccaa gcgcaaggct gagctggcca agatcaagca gaagaaccgg
1381 cgcttcaagg agaaggtgga ggagacgctg aagcgacaga aggctggcag ggctggccac
1441 aaggggcgtc cacccaggac accgtctggg tcccactcag gcccagtccc ctcccagggc
1501 ctggtctgag ccccacacgg ccatctgccc agtccttgac tcgtccatgg agctgagggt
1561 cggaggaacc ttccttgggg gcagcagccc ttcccggggg cctacccagt gccccacagc
1621 agaacccgtg ggcgctcgtg ttgtgcgggc cctgctcctc tgccccgaaa ccactggctg
1681 gccccttccc tgagccctgg ccaagattca ggctgcaggg gaagaaagaa catgaccggg
1741 aggttgtgac cccaacccaa ggtcaccccc caggggtgcc gcatacagga ggtgcttaat
1801 aaacgggtct tttgacttcc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
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