LOCUS BC002635 1841 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens colony stimulating factor 2 receptor, alpha,
low-affinity (granulocyte-macrophage), mRNA (cDNA clone MGC:3848
IMAGE:3606186), complete cds.
ACCESSION BC002635
VERSION BC002635.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1841)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1841)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: c Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27437035.
FEATURES Location/Qualifiers
source 1..1841
/db_xref="H-InvDB:HIT000031053_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3848 IMAGE:3606186"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1841
/gene="CSF2RA"
/gene_synonym="CD116"
/gene_synonym="CDw116"
/gene_synonym="CSF2RAX"
/gene_synonym="CSF2RAY"
/gene_synonym="CSF2RX"
/gene_synonym="CSF2RY"
/gene_synonym="GM-CSF-R-alpha"
/gene_synonym="GMCSFR"
/gene_synonym="GMR"
/gene_synonym="MGC3848"
/gene_synonym="MGC4838"
/db_xref="GeneID:1438"
/db_xref="HGNC:HGNC:2435"
/db_xref="MIM:425000"
CDS 171..1373
/gene="CSF2RA"
/gene_synonym="CD116"
/gene_synonym="CDw116"
/gene_synonym="CSF2RAX"
/gene_synonym="CSF2RAY"
/gene_synonym="CSF2RX"
/gene_synonym="CSF2RY"
/gene_synonym="GM-CSF-R-alpha"
/gene_synonym="GMCSFR"
/gene_synonym="GMR"
/gene_synonym="MGC3848"
/gene_synonym="MGC4838"
/codon_start=1
/product="colony stimulating factor 2 receptor, alpha,
low-affinity (granulocyte-macrophage)"
/protein_id="AAH02635.1"
/db_xref="GeneID:1438"
/db_xref="HGNC:HGNC:2435"
/db_xref="MIM:425000"
/translation="MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRT
MNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQ
RGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRR
REIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERF
NPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGD
LENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVG
TLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEGKGYREE
VLTVKEIT"
BASE COUNT 532 a 438 c 458 g 413 t
ORIGIN
1 ggcacgaggc gagagaagaa aagcaggtgg aaggagagga agcggatgcc gtggggttta
61 cagcaggaaa atccgtggag acagcagatc cgagaagcgg cgatgtttgc gtagaaccct
121 gtacgtgctt ccttcggcct gtcgctcttc ccttctctct gaccagcacc atgcttctcc
181 tggtgacaag ccttctgctc tgtgagttac cacacccagc attcctcctg atcccagaga
241 aatcggatct gcgaacagtg gcaccagcct ctagtctcaa tgtgaggttt gactccagga
301 cgatgaattt aagctgggac tgccaagaaa acacaacctt cagcaagtgt ttcttaactg
361 acaagaagaa cagagtcgtg gaacccaggc tcagtaacaa cgaatgttcg tgcacatttc
421 gtgaaatttg tctgcatgaa ggagtcacat ttgaggttca cgtgaatact agtcaaagag
481 gatttcaaca gaaactgctt tatccaaatt caggaaggga gggtaccgct gctcagaatt
541 tctcctgttt catctacaat gcggatttaa tgaactgtac ctgggcgagg ggtccgacgg
601 ccccccgtga cgtccagtat tttttgtaca tacgaaactc aaagagaagg agggagatcc
661 ggtgtcctta ttacatacaa gactcaggaa cccatgtggg atgtcacctg gataacctgt
721 caggattaac gtctcgcaat tactttctgg ttaacggaac cagccgagaa attggcatcc
781 aattctttga ttcacttttg gacacaaaga aaatagaacg attcaaccct cccagcaatg
841 tcaccgtacg ttgcaacacg acgcactgcc tcgtacggtg gaaacagccc aggacctatc
901 agaagctgtc gtacctggac tttcagtacc agctggacgt ccacagaaag aatacccagc
961 ctggcacgga aaacctactg attaatgttt ctggtgattt ggaaaataga tacaactttc
1021 caagctctga gcccagagca aaacacagtg tgaagatcag agctgcagac gtccgcatct
1081 tgaattggag ctcctggagt gaagccattg aatttggttc tgacgacggg aacctcggct
1141 ctgtgtacat ttatgtgctc ctaatcgtgg gaacccttgt ctgtggcatc gtcctcggct
1201 tcctctttaa aaggttcctt aggatacagc ggctgttccc gccagttcca cagatcaaag
1261 acaaactgaa tgataaccat gaggtggaag acgagatcat ctgggaggaa ttcaccccag
1321 aggaagggaa aggctaccgc gaagaggtct tgaccgtgaa ggaaattacc tgagacccag
1381 agggtgtagg aatggcatgg acatctccgc ctccgcgaca cgggggaact gttttcttga
1441 tgatgctgtg aacctttata tcattttcta tgtttttatt taaaaacatg acatttgggg
1501 ccaggcgcgg tggctcacgc ctgtaatccc agcactttgg gaggccaagg caggcggatc
1561 acctgaggtc aggagttcaa gaccagcctg cccaacatgg tgaaacccca tctggactaa
1621 aaatgcagaa atttacccag gcacggcggc ggacgcccat catcccagct acttgggagg
1681 ctgaggcagg agaattgctt gaacccgtga ggcggaggtt gtagtgagcc aagatcgcac
1741 cattgcacac caacctgggt gacagagcaa gattgcatct caaaacaaac aataataata
1801 aataataaaa acctgaaaaa aaaaaaaaaa aaaaaaaaaa a
//