LOCUS BC002634 1366 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens SEC13 homolog (S. cerevisiae), mRNA (cDNA clone
MGC:4272 IMAGE:3605545), complete cds.
ACCESSION BC002634
VERSION BC002634.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1366)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1366)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002634.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: c Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34335135.
FEATURES Location/Qualifiers
source 1..1366
/db_xref="H-InvDB:HIT000031052"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4272 IMAGE:3605545"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1366
/gene="SEC13"
/gene_synonym="SEC13R"
/db_xref="GeneID:6396"
/db_xref="HGNC:HGNC:10697"
/db_xref="MIM:600152"
CDS 43..1020
/gene="SEC13"
/gene_synonym="SEC13R"
/codon_start=1
/product="SEC13 homolog (S. cerevisiae)"
/protein_id="AAH02634.2"
/db_xref="GeneID:6396"
/db_xref="HGNC:HGNC:10697"
/db_xref="MIM:600152"
/translation="MGKMVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFD
VRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEH
AGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVS
WAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWV
RDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSIT
ANILAVSGGDNKVTLWKESVDGQWVCISDVNKGQGSVSASVTEGQQNEQ"
BASE COUNT 351 a 346 c 382 g 287 t
ORIGIN
1 cagccaccgc cgcaatcatg ggcttgtgct ggaaaagatg aaatggggaa aatggtgtca
61 gtaattaaca ctgtggatac ctcccatgag gacatgattc acgacgccca gatggactac
121 tatggcaccc gcctggcaac ctgctcatca gacaggtccg tcaaaatctt tgatgtgcgc
181 aatggagggc agatccttat cgccgacctc aggggtcatg agggtcctgt gtggcaagtg
241 gcctgggctc accccatgta cggcaacatc ctggcatcgt gctcctatga ccggaaagtc
301 attatctgga gagaggaaaa cggcacctgg gagaagagcc acgagcatgc gggacacgac
361 tcctcagtga actcggtgtg ctgggccccc catgactacg gcctgatcct ggcctgtggg
421 agctcggatg gggccatctc cctgctgact tacaccgggg aaggccaatg ggaagtaaag
481 aagatcaaca acgctcacac cattggctgc aatgccgtca gctgggcccc tgctgttgta
541 cctggaagcc tcatagacca cccatcgggg cagaaaccca attacatcaa gaggtttgca
601 tcaggtggct gtgacaacct catcaagctg tggaaggagg aggaggacgg ccagtggaag
661 gaggagcaga agctagaagc gcacagtgac tgggttcgag atgtggcctg ggccccctcc
721 atcggcctgc ccaccagcac catcgccagc tgctcccagg atggtcgtgt gttcatttgg
781 acctgtgatg atgcctcaag caatacgtgg tcccctaaat tgttgcacaa gttcaacgat
841 gtggtgtggc atgtgagctg gtccatcaca gccaacatcc tggctgtctc tggtggagac
901 aataaggtga ccctgtggaa ggagtcagtt gatgggcagt gggtgtgcat cagtgatgtc
961 aacaagggcc agggctccgt atcagcatca gtgacagagg gccagcagaa cgagcagtga
1021 caagacaggt ggggcctggc tccccacccg ccagctccag gactgcccct tcctgggcca
1081 actaaccaga caactgggaa gagcccccaa ctccaacagg attattttcc caggaggagt
1141 tacagatgca gccacagatt gatcatctgc cttaacgtga tcggagatgc cttgtaatct
1201 actgtccagc tgaaagcact catgttacga ggaagaaact acaagtgatg ttcaaatcta
1261 ttttgggtca tttttatgta cctttgggtt caggcattat ttggggggtt ttgtttccaa
1321 aggaactaaa taaagtcata ttgcttataa aaaaaaaaaa aaaaaa
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