LOCUS BC002574 4085 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens ring finger and WD repeat domain 3, mRNA (cDNA clone
IMAGE:3161161), partial cds.
ACCESSION BC002574
VERSION BC002574.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4085)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4085)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 24, 2004 this sequence version replaced BC002574.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: b Column: 20.
FEATURES Location/Qualifiers
source 1..4085
/db_xref="H-InvDB:HIT000031003"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3161161"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..4085
/gene="RFWD3"
/gene_synonym="FLJ10520"
/gene_synonym="RNF201"
/db_xref="GeneID:55159"
/db_xref="HGNC:HGNC:25539"
CDS <1..1800
/gene="RFWD3"
/gene_synonym="FLJ10520"
/gene_synonym="RNF201"
/codon_start=1
/product="RFWD3 protein"
/protein_id="AAH02574.2"
/db_xref="GeneID:55159"
/db_xref="HGNC:HGNC:25539"
/translation="APLDAYFQVSRTQPDLPATTYDSETRNPVSEELQVSSSSDSDSD
SSAEYGGVVDQAEESGAVILEEQLAGVSAEQEVTCIDGGKTLPKQPSPQKSEPLLPSA
SMDEEEGDTCTICLEQWTNAGDHRLSALRCGHLFGYRCISTWLKGQVRKCPQCNKKAR
HSDIVVLYARTLRALDTSEQERMKSSLLKEQMLRKQAELESAQCRLQLQVLTDKCTRL
QRRVQDLQKLTSHQSQNLQQPRGSQAWVLSCSPSSQGQHKHKYHFQKTFTVSQAGNCR
IMAYCDALSCLVISQPSPQASFLPGFGVKMLSTANMKSSQYIPMHGKQIRGLAFSSYL
RGLLLSASLDNTIKLTSLETNTVVQTYNAGRPVWSCCWCLDEANYIYAGLANGSILVY
DVRNTSSHVQELVAQKARCPLVSLSYMPRAASAAFPYGGVLAGTLEDASFWEQKMDFS
HWPHVLPLEPGGCIDFQTENSSRHCLVTYRPDKNHTTIRSVLMEMSYRLDDTGNPICS
CQPVHTFFGGPTCKLLTKNAIFQSPENDGNILVCTGDEAANSALLWDAASGSLLQDLQ
TDQPVLDICPFEVNRNSYLATLTEKMVHIYKWE"
BASE COUNT 1105 a 896 c 951 g 1133 t
ORIGIN
1 gcaccattgg atgcttactt tcaggtgagc aggacccagc ctgacttgcc agctaccact
61 tatgattcag agactaggaa tcctgtatct gaagagttgc aggtgtctag tagttctgat
121 tctgacagtg acagctctgc agagtatgga ggggttgttg accaggcaga ggaatctgga
181 gctgtcattt tagaagagca actagcaggt gtctcagcag agcaagaagt tacatgtatc
241 gatggaggca agaccctccc caaacagcca tctccccaga agtctgagcc tctgctacct
301 tctgcttcta tggatgagga agaaggggac acttgtacaa tatgtctgga acagtggacc
361 aatgctgggg accaccggct ctcagcatta cgctgtgggc atctctttgg gtataggtgc
421 atttccacgt ggcttaaagg acaagtacga aaatgtcccc agtgcaacaa gaaagccagg
481 cacagtgaca ttgtcgtcct ttatgcccga accctgagag ctttggacac tagtgaacag
541 gagcgcatga aaagttccct actgaaggaa cagatgctaa ggaaacaggc cgagttagaa
601 tcagcacagt gccgactcca actgcaggtc ctcactgata agtgcactag gcttcaaagg
661 cgtgttcagg acttgcaaaa acttacgtca catcaaagtc agaatttaca gcaacccagg
721 ggctcccaag catgggtcct gagctgctca ccctccagcc agggccagca caagcacaag
781 taccacttcc aaaagacctt cacagtatct caggcaggaa actgccggat catggcatac
841 tgtgatgctc tgagctgcct ggtgatatca cagccttctc ctcaggcctc ttttcttcca
901 ggctttggtg ttaagatgtt gagtactgcc aacatgaaga gcagtcagta cattccgatg
961 catggcaaac agatccgtgg actggcgttt agcagttacc tcagaggctt gctactctct
1021 gcttccctag acaacactat taaactgacc agcctggaga caaataccgt ggtccagact
1081 tataatgctg gacgtcctgt ctggagctgt tgctggtgtc ttgatgaggc taactacatc
1141 tatgctggac tggccaatgg ttcaattctg gtatatgacg tgcgaaacac gagcagtcat
1201 gtgcaggagt tagtagctca gaaagccaga tgcccactgg tctccctgtc atacatgccc
1261 agagctgcct cagctgcatt tccatatggt ggggtgctgg ctggaacctt ggaggatgct
1321 tcattctggg aacagaaaat ggacttttct cattggcctc atgtgctgcc cttggagcca
1381 gggggctgca tagactttca gacagagaac agctcccggc actgtcttgt gacctacagg
1441 cctgataaaa atcacaccac catacgaagt gtgctgatgg aaatgtccta ccgactggat
1501 gacactggaa atccaatctg ctcctgccag cctgtacata cattttttgg aggacctact
1561 tgcaaactat tgaccaaaaa tgccattttc caaagcccag agaatgatgg caacatcctg
1621 gtgtgtactg gggatgaagc agcaaattct gccctgctgt gggatgctgc cagtggctcg
1681 ttgctccagg acctacagac cgatcagcct gtgttggaca tctgcccatt tgaggtgaac
1741 cgtaacagct acttggctac cttaacagag aagatggtcc acatctataa gtgggagtga
1801 ctgtggtctc gaaaccttga aggcatgctg ctggttagat gttgtttgct agcgcctagc
1861 agccccaagc aagatccctg tttattgtct gcagtctaga acattgggaa tcatggtttg
1921 tttgcattag tatgattcta ggaccctagg tcactgagac actacagatt gtgtatctgt
1981 tatgtccact aaaagagtaa ttgatgggta ctttatctac attatccatt tcttgggttt
2041 aaagccttca ttaaccatta ttgtatgttg gaaattctta ttttctttat tttctgtgtg
2101 actttctgga ccttagagag tgtcctctca tcatctagga tgtgagtggg catcaagcat
2161 tttctgggga atatgacatc ccatctgagt tgtcctgtca cttaagtatc cttgaaggga
2221 ctaaccatcg tcttggtact gatttgatgc aacgtagatg taaaagagta ttattcagtt
2281 gaacacaaga gggcactgta gaaccttgtg tccggtttat ttctgacctt gaaggctgac
2341 aatcttttag taacttgtct catctccaca caagtgtgtg atagcacacc tgggtgtgct
2401 ttgtggcaat aacacttgtg ttccaggtgt gaagtgctgg gacattggca ggcccagtga
2461 tggaagcagc tagtgaacga ttccctttgc taatgcctag tgcattaagt tcattgcttt
2521 gcgaaaggta aggaaagagg ccagttgttt gagcggtggg gaagattttg ttttttctag
2581 ccagcttagg atctcaggat tggttttatc caagctagtg ctttgaagaa cactatctct
2641 tgccaggaaa agatgagtga taggtcaaag cttttacttg agtctcccct agtgtcagag
2701 atcaggagaa aagacataag agaatttaca aaagctattc agactgctat tgaaaacatg
2761 agaagaactt gtctcccatt ttgagagttc ctatctaaat aaagccaatt cctcagactg
2821 aggggctgtt cttaagtgtt ctttatacat tccagttatc cagttaaagc cttccccatg
2881 tgaagctgat gtttgattcc agtttccttt gatttgcctc cctaaccttt tctagggctc
2941 agtttgtatt tctttgcctt gcctcagact actttgccaa cccacttcca caacagaata
3001 tgcttcaaga tgtgggcagg tcagtgtcct gttcatggga gaaaatggct taacagtctg
3061 attttctcaa atgattattg aagagttgtt atcgttttta ttataaaaca cttctgacct
3121 gtcaattcaa gagctgtttc taggatcttt ctctccggca aggggttgtt gcactagatt
3181 tccccagagt tccaagttct agttgtgcct tttaatgacc ctttaatatt ttaggacata
3241 attttttcct tttttaaatt tttttgtaga aatagatgtt tcactacgtt gtccaggctg
3301 gtcttggact cctggcctca agcaatcctc ccacctcagc ctcctaaagt gccaaaatta
3361 taggcgtgag ccactgcacc cggcccctat ttgaagacgt cttttgtaaa agctagcttc
3421 tagaacctga gaaaagctct tttctcagag gagatactcc ttttgatatg ttaatgatta
3481 agagtggttg cccaggccta gtttcagtgg cagaatagga ttggaattaa aaagcagaac
3541 tcatctggct tcagcagatt gccaccaaga ggatacaggt ggtcaggtcc tggctggctt
3601 tgtctttggg cctgggcagg cttaggattt gactttcttt gaagtacctg atgctgattg
3661 attccactaa tagtaggaag caagagactt aactatgagg gacgttatgt gaatcttaag
3721 tcttaccagt ccttgcatta gtacattaaa tttggatgtt ttggaagcaa attcatacga
3781 tcgtgagtga tttctccaaa gaaaaaaagc cttgtccagc ctgaccaaca tggtgaaacc
3841 ccatctctac taaaaataca aaaattaact gggtgcagtg gtgcgcatgc ctgtagtccc
3901 agctacttgg gaggctgagg caggagaatt gcttgaaccc tgggaggcag aggttgcagt
3961 gagtcgagat cgcgccactg cactccagcc tcggtgacag agcaagactc catctcaaaa
4021 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
4081 aaaaa
//