LOCUS BC002564 3149 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein U-like 1, mRNA
(cDNA clone MGC:1974 IMAGE:3139049), complete cds.
ACCESSION BC002564
VERSION BC002564.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3149)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3149)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002564.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: n Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21536319.
FEATURES Location/Qualifiers
source 1..3149
/db_xref="H-InvDB:HIT000030996"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1974 IMAGE:3139049"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3149
/gene="HNRPUL1"
/gene_synonym="E1B-AP5"
/gene_synonym="E1BAP5"
/gene_synonym="FLJ12944"
/db_xref="GeneID:11100"
/db_xref="HGNC:HGNC:17011"
/db_xref="MIM:605800"
CDS 71..2641
/gene="HNRPUL1"
/gene_synonym="E1B-AP5"
/gene_synonym="E1BAP5"
/gene_synonym="FLJ12944"
/codon_start=1
/product="heterogeneous nuclear ribonucleoprotein U-like
1"
/protein_id="AAH02564.1"
/db_xref="GeneID:11100"
/db_xref="HGNC:HGNC:17011"
/db_xref="MIM:605800"
/translation="MDVRRLKVNELREELQRRGLDTRGLKAELAERLQAALEAEEPDD
ERELDADDEPGRPGHINEEVETEGGSELEGTAQPPPPGLQPHAEPGCYSGPDGHYAMD
NITRQNQFYDTQVIKQENESGYERRPLEMEQQQAYRPEMKTEMKQGAPTSFLPPEASQ
LKPDRQQFQSRKRPYEENRGRGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNC
DLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTE
PDPHVVRIGWSLDSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFAD
FECGNDVELSFTKNGKWMGIAFRIQKEALGGQALYPHVLVKNCAVEFNFGQRAEPYCS
VLPGFTFIQHLPLSERIRGTVGPKSKAECEILMMVGLPAAGKTTWAIKHAASNPSKKY
NILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQIAARKKRNYILDQTN
VYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDVPDHAVLEMKANFT
LPDVGDFLDEVLFIELQREEADKLVRQYNEEGRKAGPPPEKRFDNRGGGGFRGRGGGG
GFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWGNNNRDNNNS
NNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSA
NTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYT
PPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYGNYDYGSYSGNTQGGTSTQ
"
BASE COUNT 788 a 953 c 856 g 552 t
ORIGIN
1 gaaaggttta agggggacag agccctggga ggccgggccg ggctcggggg ccaccccggg
61 ggcccgggcc atggatgtgc gccgtctgaa ggtgaacgaa cttcgcgagg agctgcagcg
121 ccgcggcctg gacactcgag gcctcaaggc cgagcttgct gagcggctgc aggcggcgtt
181 ggaggccgag gagcctgacg acgagcggga gctcgacgcc gacgacgaac cggggcgacc
241 cgggcacatc aacgaggagg tcgagaccga ggggggctcc gagctggagg ggaccgcgca
301 gccaccgccg cccgggctgc agccgcacgc ggagcccggc tgctactcgg ggccggacgg
361 acattatgcc atggacaata ttaccaggca gaaccaattc tacgataccc aagtcatcaa
421 acaagaaaac gagtcaggct acgagaggag accactggaa atggagcagc agcaggccta
481 tcgtccagaa atgaagacag agatgaagca aggagcaccc accagcttcc tcccgcctga
541 agcttctcaa ctcaagccag acaggcagca attccagagt cgaaagaggc cttatgaaga
601 aaaccgggga cgggggtact ttgagcaccg agaggatagg aggggccgct ctcctcagcc
661 tcctgctgaa gaggatgaag atgactttga tgataccctt gttgctattg acacctataa
721 ctgcgacctc cacttcaagg tggcccgaga tcggagtagt ggctatccgc tcacaattga
781 gggctttgca tacctgtggt caggagcccg tgccagctat ggggtcagaa ggggccgtgt
841 atgcttcgag atgaagatca atgaggaaat ctccgtgaag caccttccgt ctacagagcc
901 tgacccccac gtggtccgta tcggctggtc cctggactcc tgcagcaccc agctaggcga
961 agagcctttc tcctatggct atggaggcac tgggaagaag tccaccaata gccggtttga
1021 aaactacgga gacaagtttg cagagaacga tgtgattggc tgctttgcgg attttgaatg
1081 tggaaatgac gtggaactgt cttttaccaa gaatggaaag tggatgggca ttgctttccg
1141 aatccagaag gaagccttgg ggggtcaggc cctctatcct catgtcctgg tgaagaattg
1201 cgcagtggag ttcaacttcg gacagagagc agagccctac tgttctgtcc tcccggggtt
1261 taccttcatc cagcaccttc cccttagtga gcgtatccgg ggcaccgttg gaccaaagag
1321 caaggcagaa tgtgagattc tgatgatggt gggcctgcct gctgctggca agaccacatg
1381 ggccatcaaa catgcagcct ccaacccttc caagaagtac aacatcctgg gtaccaatgc
1441 catcatggat aagatgcggg tgatgggcct acgccggcag cggaactatg ctggccgctg
1501 ggatgtcctg atccagcagg ccacccagtg cctcaaccgc ctcatccaga ttgctgcccg
1561 caagaaacgc aactatatcc tagatcagac aaatgtttat gggtcagccc agagacgaaa
1621 aatgagacca tttgaaggct tccagcgcaa agctattgta atttgtccca ctgacgagga
1681 cctaaaagac cgaacaataa agcgaaccga cgaggaaggg aaggatgtcc cagatcatgc
1741 ggtcttagaa atgaaagcca acttcacgtt gccagatgtt ggggacttcc tggatgaggt
1801 tctgttcatt gagctgcagc gggaggaagc ggacaagcta gtgaggcagt acaacgagga
1861 aggccgcaag gctgggccac cccctgaaaa gcgctttgac aaccgaggtg gtggtggctt
1921 ccggggccgc gggggtggtg gtggcttcca gcgctatgaa aaccgaggac cccctggagg
1981 caaccgtggc ggcttccaga accgaggggg aggcagcggt ggaggaggca actaccgagg
2041 aggtttcaac cgcagcggag gtggtggcta tagccagaac cgctggggta acaacaaccg
2101 ggataacaac aactccaaca acagaggcag ctacaaccgg gctccccagc aacagccgcc
2161 accacagcag cctccgccac cacagccacc accccagcag ccaccgccac cacccagcta
2221 cagccctgct cggaaccccc caggggccag cacctacaat aagaacagca acatccctgg
2281 ctcaagcgcc aataccagca cccccaccgt cagcagctac agccctccac agccgagtta
2341 cagccagcca ccctacaacc agggaggtta cagccagggc tacacagccc caccgcctcc
2401 acctccacca ccacctgcct acaactatgg gagctacggc ggttacaacc cggcccccta
2461 taccccaccg ccacccccca ccgcacagac ctaccctcag cccagctata accagtatca
2521 gcagtatgcc cagcagtgga accagtacta tcagaaccag ggccagtggc cgccatacta
2581 cgggaactac gactacggga gctactccgg gaacacacag ggtggcacaa gtacacagta
2641 gccagtgtga cccagaggct cccggaggcc cctgccggct tcctccacca gcgcctgcct
2701 cggcccctcc tctgcccccg ccagatcccg tggtgctggg gatggggtca tcccagggct
2761 gcctccctcc agcccactgc ctcccctctg aggggcttcc ttcccctcca tagggccagg
2821 catttttttc tggattcaaa caggcaacaa tgacctttta ttttctgttt gtccccacct
2881 ccccagcctt ccacctcctg ttcttcctac cttcttcctt tttgactaaa taatccccac
2941 ctcccttgat catacagtga ggctacagtg actgagggga gaatcccctc ctgttcactc
3001 tcccaaccct gctccagccc ctcagcttcc cagaccctca tgcagttggt tgtaaattct
3061 cccaggagct gttttactgt ctacttttca ggattaaaaa aaaaatcaaa acttaaaaaa
3121 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//