LOCUS BC002563 2041 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens solute carrier family 39 (zinc transporter), member 1, mRNA (cDNA clone MGC:836 IMAGE:3138575), complete cds. ACCESSION BC002563 VERSION BC002563.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2041) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2041) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC002563.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 4 Row: n Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34147669. FEATURES Location/Qualifiers source 1..2041 /db_xref="H-InvDB:HIT000030995" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:836 IMAGE:3138575" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_21" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2041 /gene="SLC39A1" /gene_synonym="ZIP1" /db_xref="GeneID:27173" /db_xref="HGNC:HGNC:12876" /db_xref="MIM:604740" CDS 62..1036 /gene="SLC39A1" /gene_synonym="ZIP1" /codon_start=1 /product="solute carrier family 39 (zinc transporter), member 1" /protein_id="AAH02563.1" /db_xref="GeneID:27173" /db_xref="HGNC:HGNC:12876" /db_xref="MIM:604740" /translation="MGPWGEPELLVWRPEAVASEPPVPVGLEVKLGALVLLLVLTLLC SLVPICVLRRPGANHEGSASRQKALSLVSCFAGGVFLATCLLDLLPDYLAAIDEALAA LHVTLQFPLQEFILAMGFFLVLVMEQITLAYKEQSGPSPLEETRALLGTVNGGPQHWH DGPGVPQASGAPATPSALRACVLVFSLALHSVFEGLAVGLQRDRARAMELCLALLLHK GILAVSLSLRLLQSHLRAQVVAGCGILFSCMTPLGIGLGAALAESAGPLHQLAQSVLE GMAAGTFLYITFLEILPQELASSEQRILKVILLLAGFALLTGLLFIQI" BASE COUNT 427 a 548 c 596 g 470 t ORIGIN 1 cggagaccat gtagtgagac cctcgcgagg tctgagagtc actggagcta ccagaagcat 61 catggggccc tggggagagc cagagctcct ggtgtggcgc cccgaggcgg tagcttcaga 121 gcctccagtg cctgtggggc tggaggtgaa gttgggggcc ctggtgctgc tgctggtgct 181 caccctcctc tgcagcctgg tgcccatctg tgtgctgcgc cggccaggag ctaaccatga 241 aggctcagct tcccgccaga aagccctgag cctagtaagc tgtttcgcgg ggggcgtctt 301 tttggccact tgtctcctgg acctgctgcc tgactacctg gctgccatag atgaggccct 361 ggcagccttg cacgtgacgc tccagttccc actgcaagag ttcatcctgg ccatgggctt 421 cttcctggtc ctggtgatgg agcagatcac actggcttac aaggagcagt cagggccgtc 481 acctctggag gaaacaaggg ctctgctggg aacagtgaat ggtgggccgc agcattggca 541 tgatgggcca ggggtcccac aggcgagtgg agccccagca accccctcag ccttgcgtgc 601 ctgtgtactg gtgttctccc tggccctcca ctccgtgttc gaggggctgg cggtagggct 661 gcagcgagac cgggctcggg ccatggagct gtgcctggct ttgctgctcc acaagggcat 721 cctggctgtc agcctgtccc tgcggctgtt gcagagccac cttagggcac aggtggtggc 781 tggctgtggg atcctcttct catgcatgac acctctaggc atcgggctgg gtgcagctct 841 ggcagagtcg gcaggacctc tgcaccagct ggcccagtct gtgctagagg gcatggcagc 901 tggcaccttt ctctatatca cctttctgga aatcctgccc caggagctgg ccagttctga 961 gcaaaggatc ctcaaggtca ttctgctcct agcaggcttt gccctgctca ctggcctgct 1021 cttcatccaa atctaggggg cttcaagaga ggggcagggg agattgatga tcaggtgccc 1081 ctgttctccc ttccctcccc cagttgtggg gaataggaag gaaaggggaa gggaaatact 1141 gaggaccaaa aagttctctg ggagctaaag atagagcctt tggggctatc tgactaatga 1201 gagggaagtg ggcagacaag aggctggccc cagtcccaag gaacaagaga tggtcaagtc 1261 gctagagaca tatcagggga cattaggatt ggggaagaca cttgactgct agaatcagag 1321 gttggacact atacataaga acaggctcac atgggaggct ggaggtgggt acccagctgc 1381 tgtggaacgg gtatggacag gtcataaacc tagagtcagt gtcctgttgg tcctagccca 1441 tttcagcacc ctgccacttg gagtggaccc ctcctactct tcttagcgcc taccctcata 1501 cctatctccc tcctcccatc tcctagggga ctggcgccaa atggtctctc cctgccaatt 1561 ttggtatctt ctctggcctc tccagtcctg cttactcctc tatttttaaa gtgccaaaca 1621 aatccccttc ctctttctca aagcacagta atgtggcact gagccctacc cagcacctca 1681 gtgaaggggg cctgcttgct ctttattttg gtcccggatc ctggggtggg gcagaaatat 1741 tttctgggct ggggtaggag gaaggttgtt gcagccatct actgctgctg taccctagga 1801 atatggggac atggacatgg tgtcccatgc ccagatgata aacactgagc tgccaaaaca 1861 tttttttaaa tacacccgag gagcccaagg gggaagggca atgcctaccc ccagcgttat 1921 ttttggggag ggagggctgt gcatagggac atattcttta gaatctattt tattaactga 1981 cctgttttgg gacctgttac ccaaataaaa gatgtttcta gaaaaaaaaa aaaaaaaaaa 2041 a //