LOCUS BC002539 1433 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens keratin 19, mRNA (cDNA clone MGC:1712 IMAGE:3138504),
complete cds.
ACCESSION BC002539
VERSION BC002539.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1433)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1433)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC002539.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: b Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40217850.
FEATURES Location/Qualifiers
source 1..1433
/db_xref="H-InvDB:HIT000030975"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1712 IMAGE:3138504"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1433
/gene="KRT19"
/gene_synonym="CK19"
/gene_synonym="K19"
/gene_synonym="K1CS"
/db_xref="GeneID:3880"
/db_xref="HGNC:HGNC:6436"
/db_xref="MIM:148020"
CDS 47..1249
/gene="KRT19"
/gene_synonym="CK19"
/gene_synonym="K19"
/gene_synonym="K1CS"
/codon_start=1
/product="keratin 19"
/protein_id="AAH02539.3"
/db_xref="GeneID:3880"
/db_xref="HGNC:HGNC:6436"
/db_xref="MIM:148020"
/translation="MTSYSYRQSSATSSFGGLGGGSVRFGPGVAFRAPSIHGGSGGRG
VSVSSARFVSSSSSGGYGGGYGGVLTASDGLLAGNEKLTMQNLNDRLASYLDKVRALE
AANGELEVKIRDWYQKQGPGPSRDYSHYYTTIQDLRDKILGATIENSRIVLQIDNARL
AADDFRTKFETEQALRMSVEADINGLRRVLDELTLARTDLEMQIEGLKEELAYLKKNH
EEEISTLRGQVGGQVSVEVDSAPGTDLAKILSDMRSQYEVMAEQNRKDAEAWFTSRTE
ELNREVAGHTEQLQMSRSEVTDLRRTLQGLEIELQSQLSMKAALEDTLAETEARFGAQ
LAHIQALISGIEAQLGDVRADSERQNQEYQRLMDIKSRLEQEIATYRSLLEGQEDHYN
NLSASKVL"
BASE COUNT 340 a 399 c 449 g 245 t
ORIGIN
1 cgcagcttct gagaccaggg ttgctccgtc cgtgctccgc ctcgccatga cttcctacag
61 ctatcgccag tcgtcggcca cgtcgtcctt cggaggcctg ggcggcggct ccgtgcgttt
121 tgggccgggg gtcgcttttc gcgcgcccag cattcacggg ggctccggcg gccgcggcgt
181 atccgtgtcc tccgcccgct ttgtgtcctc gtcctcctcg gggggctacg gcggcggcta
241 cggcggcgtc ctgaccgcgt ccgacgggct gctggcgggc aacgagaagc taaccatgca
301 gaacctcaac gaccgcctgg cttcctacct ggacaaggtg cgcgccctgg aggcggccaa
361 cggcgagcta gaggtgaaga tccgcgactg gtaccagaag caggggcctg ggccctcccg
421 cgactacagc cactactaca cgaccatcca ggacctgcgg gacaagattc ttggtgccac
481 cattgagaac tccaggattg tcctgcagat cgacaacgcc cgtctggctg cagatgactt
541 ccgaaccaag tttgagacgg aacaggctct gcgcatgagc gtggaggccg acatcaacgg
601 cctgcgcagg gtgctggatg agctgaccct ggccaggacc gacctggaga tgcagatcga
661 aggcctgaag gaagagctgg cctacctgaa gaagaaccat gaggaggaaa tcagtacgct
721 gaggggccaa gtgggaggcc aggtcagtgt ggaggtggat tccgctccgg gcaccgatct
781 cgccaagatc ctgagtgaca tgcgaagcca atatgaggtc atggccgagc agaaccggaa
841 ggatgctgaa gcctggttca ccagccggac tgaagaattg aaccgggagg tcgctggcca
901 cacggagcag ctccagatga gcaggtccga ggttactgac ctgcggcgca cccttcaggg
961 tcttgagatt gagctgcagt cacagctgag catgaaagct gccttggaag acacactggc
1021 agaaacggag gcgcgctttg gagcccagct ggcgcatatc caggcgctga tcagcggtat
1081 tgaagcccag ctgggcgatg tgcgagctga tagtgagcgg cagaatcagg agtaccagcg
1141 gctcatggac atcaagtcgc ggctggagca ggagattgcc acctaccgca gcctgctcga
1201 gggacaggaa gatcactaca acaatttgtc tgcctccaag gtcctctgag gcagcaggct
1261 ctggggcttc tgctgtcctt tggagggtgt cttctgggta gagggatggg aaggaaggga
1321 cccttacccc cggctcttct cctgacctgc caataaaaat ttatggtcca agggaaaaaa
1381 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//