LOCUS BC002520 1139 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens COP9 constitutive photomorphogenic homolog subunit 6
(Arabidopsis), mRNA (cDNA clone MGC:1263 IMAGE:3140042), complete
cds.
ACCESSION BC002520
VERSION BC002520.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1139)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1139)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002520.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: e Column: 12.
FEATURES Location/Qualifiers
source 1..1139
/db_xref="H-InvDB:HIT000030959"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1263 IMAGE:3140042"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1139
/gene="COPS6"
/gene_synonym="MOV34-34KD"
/db_xref="GeneID:10980"
/db_xref="HGNC:HGNC:21749"
CDS 6..989
/gene="COPS6"
/gene_synonym="MOV34-34KD"
/codon_start=1
/product="COP9 constitutive photomorphogenic homolog
subunit 6 (Arabidopsis)"
/protein_id="AAH02520.2"
/db_xref="GeneID:10980"
/db_xref="HGNC:HGNC:21749"
/translation="MAAAAAAAAATNGTGGSSGMEVDAAVVPSVMACGVTGSVSVALH
PLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKIIIDK
EYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKH
TDLPVSVFESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENSTVA
EHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFK
TDFYDQCNDVGLMAYLGTITKTCNTMNQFVNKFNVLYDRQGIGRRMRGLFF"
BASE COUNT 308 a 282 c 321 g 228 t
ORIGIN
1 ggaaaatggc ggcggcggcg gcggcggctg cagctacgaa cgggaccgga ggaagcagcg
61 ggatggaggt ggatgcagca gtagtcccca gcgtgatggc ctgcggagtg actgggagtg
121 tttccgtcgc tctccatccc cttgtcattc tcaacatctc agaccactgg atccgcatgc
181 gctcccagga ggggcggcct gtgcaggtga ttggggctct gattggcaag caggagggcc
241 gaaatatcga ggtgatgaac tcctttgagc tgctgtccca caccgtggaa gagaagatta
301 tcattgacaa ggaatattat tacaccaagg aggagcagtt taaacaggtg ttcaaggagc
361 tggagtttct gggttggtat accacagggg ggccacctga cccctcggac atccacgtcc
421 ataagcaggt gtgtgagatc atcgagagcc ccctctttct gaagttgaac cctatgacca
481 agcacacaga tcttcctgtc agcgtttttg agtctgtcat tgatataatc aatggagagg
541 ccacaatgct gtttgctgag ctgacctaca ctctggccac agaggaagcg gaacgcattg
601 gtgtagacca cgtagcccga atgacagcaa caggcagtgg agagaactcc actgtggctg
661 aacacctgat agcacagcac agcgccatca agatgctgca cagccgcgtc aagctcatct
721 tggagtacgt caaggcctct gaagcgggag aggtcccctt taatcatgag atcctgcggg
781 aggcctatgc tctgtgtcac tgtctcccgg tgctcagcac agacaagttc aagacagatt
841 tttatgatca atgcaacgac gtggggctca tggcctacct cggcaccatc accaaaacgt
901 gcaacaccat gaaccagttt gtgaacaagt tcaatgtcct ctacgaccga caaggcatcg
961 gcaggagaat gcgcgggctc tttttctgat gagggtactt gaagggctga tggacagggg
1021 tcaggcaact atcccaaagg ggagggcact acacttcctt gagagaaacc gctgtcatta
1081 ataaaagggg agcagcccct gagcaccaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//