LOCUS BC002507 1230 bp mRNA linear HUM 01-OCT-2003
DEFINITION Homo sapiens WD repeat domain 13, mRNA (cDNA clone IMAGE:3051308),
partial cds.
ACCESSION BC002507
VERSION BC002507.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1230)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1230)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 1, 2003 this sequence version replaced BC002507.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: k Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20544181.
FEATURES Location/Qualifiers
source 1..1230
/db_xref="H-InvDB:HIT000030949"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3051308"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1230
/gene="WDR13"
/gene_synonym="FLJ20563"
/db_xref="GeneID:64743"
CDS <1..1025
/gene="WDR13"
/gene_synonym="FLJ20563"
/codon_start=3
/product="WDR13 protein"
/protein_id="AAH02507.2"
/db_xref="GeneID:64743"
/translation="RAMAGDTSLSENYAFAGMYHVFDQHVDEAVPRVRFANDDRHRLA
CCSLDGSISLCQLVPAPPTVLRVLRGHTRGVSDFAWSLSNDILVSTSLDATMRIWASE
DGRCIREIPDPDSAELLCCTFQPVNNNLTVVGNAKHNVHVMNISTGKKVKGGSSKLTG
RVLALSFDAPGRLLWAGDDRGSVFSFLFDMATGKLTKAKRLVVHEGSPVTSISARSWV
SREARDPSLLINACLNKLLLYRVVDNEGTLQLKRSFPIEQSSHPVRSIFCPLMSFRQG
ACVVTGSEDMCVHFFDVERAAKAAVNKLQGHSAPVLDVSFNCDESLLASSDASGMVIV
WRREQK"
misc_feature 111..1022
/gene="WDR13"
/gene_synonym="FLJ20563"
/note="COG2319; Region: FOG: WD40 repeat [General function
prediction only]"
/db_xref="CDD:COG2319"
BASE COUNT 264 a 368 c 353 g 245 t
ORIGIN
1 gtcgggccat ggccggggac acgtcactga gcgagaacta tgcctttgcg ggcatgtatc
61 atgtttttga ccagcacgtg gatgaggcag tcccaagggt gcgcttcgcc aatgatgacc
121 gacaccgcct ggcctgctgc tcactcgacg gcagcatctc cctgtgccag ctggtgcctg
181 ccccacccac agtgcttcgc gtgctacggg gccacacccg tggtgtctcc gacttcgcct
241 ggtccctctc caatgacatc ctcgtgtcca cctcactgga tgccaccatg cgcatctggg
301 cctctgagga tggtcgctgc atccgagaga tccctgaccc cgatagcgct gaactgctct
361 gctgcacctt ccagcctgtc aacaacaacc tcactgtggt ggggaacgcc aagcacaacg
421 tgcatgtcat gaacatctcc acaggcaaga aagtgaaggg gggctccagc aagctgacag
481 gccgtgtcct tgctctgtcc tttgatgccc ctggccggct gctctgggcg ggtgatgacc
541 gtggcagtgt cttctctttc ctctttgata tggccacagg gaagctgacc aaagccaagc
601 gtttggtggt gcatgagggg agccctgtga ccagcatctc agcccggtcc tgggtcagcc
661 gcgaggcccg ggatccctca ctgctcatca atgcttgcct caacaagttg ctgctctaca
721 gggtggtaga caacgagggg accctgcagc tgaagagaag cttccccatc gagcagagct
781 cacatcctgt gcgcagcatc ttctgtcccc tcatgtcctt ccgccagggg gcctgcgtgg
841 tgacgggcag tgaggacatg tgcgtgcact tctttgatgt ggagcgggcg gccaaggctg
901 ctgtcaacaa gctgcagggc cacagtgcac ctgtgcttga tgtcagcttc aactgcgacg
961 agagcctact ggcctccagt gacgccagcg gcatggtcat cgtctggagg cgggagcaga
1021 agtagggtcc tgtcggccct gctgctgtcc tccatcccac ccctcttact ccagcctcgt
1081 gttgtaaata aagtttcggt ggtcatgctg agggccggct cccagctctg ccggggacgg
1141 acagggcaga gggcagcggg cagctccagg aacacggtga aaaaaaaaaa aaaaaaaaaa
1201 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//